Cornus florida (flowering dogwood): 132300000
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Entry
132300000 CDS
T11641
Name
(RefSeq) probable E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
cflo Cornus florida (flowering dogwood)
Pathway
cflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132300000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cflo04121
]
132300000
Enzymes [BR:
cflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132300000
Ubiquitin system [BR:
cflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
132300000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
DUF8011
Motif
Other DBs
NCBI-GeneID:
132300000
NCBI-ProteinID:
XP_059652909
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MEIAPAVSASKDGGDRDTIASSVDGLKHSSSSSSSPRGAPGKEANNTVTSKYDDDDDEED
VCRICRNPGEPDNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAE
NAPARLPFQEFVIGMAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIWRLAFVRSFGEAQ
RLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLRELGGQDADREDEADRN
GARAARRPPGQVNRNFAGDGNAEDAGGAQGIAGAGQIIRRNAENVAARWEMQAARLEAHV
EQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFVPFSLGRII
LHYVSWLLPSATGPVLSTVMPLTESALSLANITLKNALTAVVNLTSENQENSLLGQVAEM
LKVNASGLNDVSNNISAPLSTDILKGASVGTSRLSDVTTLAVGYMFIFSLVFFYLGIVAL
IRYSKGEPLTMGRFYGIASIAETIPSLFRQFVAAMRHLMTMIKVAFLLVIELGVFPLMCG
WWLDVCTIRMFGKSITQRVEFFSVSPLASSLVHWVVGILYMLQISIFVSLLRGVLRNGVL
YFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSVFP
LDISVSDPFTEIPADMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVGWALGLTDFLLPK
PEDNGGQETGNGEPVRQDRLHVQQGAQDRALVGLAAPDNLNRGMHGSGSTNTTEEGDGDE
QSDSDRYGFVLRIVLLLVVAWMTLLIFNSALVVVPVYLGRAIFNAIPLLPITHGIKCNDL
YAFIIGSYVIWTALAGARYSVEHIQTRRAAVLLNQIWKWCGIVLKSSALLSIWIFVIPVL
IGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDEGWRIKF
ERVREDGFSRLQGFWVLREIVFPIIMKLLTALCVPYVLARGVFPVFGYPLVVNSAVYRFA
WLGCLGFSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEHVMERQNEADVPSEMQ
NSSSRGPGFILHDREADVGIRLRHVNRQDA
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcaccggcggtgtcggcttcgaaagacggcggcgacagggacaccatcgcc
tcctctgtcgacggcctcaagcactcttcttcttcttcatcttctccgcgtggtgcgcct
ggtaaggaggctaacaacaccgtcacgagcaagtatgacgacgacgatgacgaggaggat
gtgtgtcggatctgccggaaccctggcgagcccgataaccccctccggtacccgtgcgcg
tgcagcggaagcattaaattcgttcaccaagactgccttcttcagtggctcaatcacagc
aatgctcgccaatgcgaggtctgcaaacatgcattctcattctcccctgtttatgcggaa
aatgctccagcaaggcttccctttcaggagtttgtaattgggatggctatgaaagcatgc
catgttctgcaattctttttgcgccttagttttgtactttctgtttggcttctcataatt
cccttcatcacattttggatatggcggttggcttttgtgaggagttttggtgaagcacag
agactcttcttgagtcatatctccactacagttattcttactgattgtctgcatgggttt
ctgctctctgctagcattgtctttatttttcttggggcaacttctctgagggattacttt
agacatttgcgggagcttggaggtcaggatgctgacagagaagatgaagctgacagaaat
ggtgctcgtgctgcaagaagacctcctggacaagtgaacaggaattttgcaggtgatgga
aatgctgaagatgctggtggagcacaagggattgcaggagctggacaaataatcagaagg
aatgcagaaaatgttgctgcccggtgggagatgcaggctgctcgtcttgaggctcacgtt
gaacagatgtttgatggtctagatgatgctgatggtgcagaggatgtaccctttgatgag
ctagttggcatgcagggacctgtttttcatttggtggaaaatgcattcactgttctcgca
agcaatatgatattccttggtgttgttatctttgtgcccttttcactaggacggatcata
ctgcattatgtgtcgtggcttttgccatctgctactggtccagtgctgtcaacagtcatg
ccacttacagagtcagccctctcgttagctaatatcacattgaagaatgcattaactgcc
gttgtgaatttgacatctgaaaatcaggagaacagtttgcttggccaggttgcagaaatg
ttgaaagtaaatgctagcggactgaacgatgtctcaaacaacatcagcgcaccactttct
acagatatcttgaaaggggcatctgttggaacatcacggctgtctgatgttacgactctt
gccgttggctatatgtttatattctctctagtttttttctacctaggaattgttgcactg
attcgatacagtaaaggtgagcctttgactatggggaggttctatggtattgcttcaata
gcagaaacaattccatcccttttcaggcagtttgtggctgcaatgaggcatttaatgacc
atgattaaagttgctttccttctggtcattgaacttggagtcttcccgttgatgtgtggt
tggtggctagatgtttgtacgataaggatgtttgggaagtcaatcactcaaagagtagaa
ttcttctcagtttctccattagcaagttcgttggttcattgggttgtaggaatcctttac
atgctacaaataagtatattcgtcagccttcttcgaggggttttgcgcaatggagttctc
tactttcttcgagatcctgctgatccaaactacaatccattccgtgatcttattgatgat
cccgtgcacaagcatgctcggagggttttgctgtctgttgctgtctatgggagtctaata
gtgatgctggtatttttaccagttaaacttgccatgcgaatggctccgtctgttttccca
cttgatatttctgtatccgacccatttactgaaattcctgctgacatgctgctttttcaa
atctgcattccatttgcaattgagcattttaagttgcggacaactataaagtcccttctc
cgctattggttcactgctgttggctgggcacttggtttaactgatttcttactgcccaaa
cctgaagacaatggaggccaggaaactggaaatggggagccagtgaggcaggatagacta
catgtacagcaaggtgcacaagatcgggccctcgtaggacttgcagccccagataatttg
aacagaggcatgcatggatcagggagcactaatactactgaagagggtgatggtgacgaa
caatctgattcagacaggtatggatttgtgcttcgcatcgtgctgctgttggtggtggcg
tggatgactctacttatttttaactctgcattagtagttgtacccgtttatcttggaagg
gccatcttcaatgccatcccccttctcccaataactcatggcatcaagtgcaatgatctt
tatgctttcatcatcggaagctatgtgatttggactgctctagctggagctaggtattct
gttgagcacattcaaacaaggcgggctgcagttctgctaaaccaaatttggaaatggtgt
gggattgttttgaagagttccgctctgttgtctatatggatttttgtcatcccggtgtta
attggattgctttttgaacttttggtaattgtgccaatgcgggtgcctgtggatgaaagc
ccagtattccttttgtatcaggactgggctttgggactcatatttcttaagatctggacc
agattggtaatgctggatcacatgatgcccctggtggatgaaggttggcgaataaaattt
gagagggtgagggaagatggtttctccaggctgcagggcttttgggtgctgcgggagata
gtgttccctattattatgaaactgcttactgcgctgtgtgttccctacgttttagctaga
ggggtgtttcccgtgtttgggtacccgttagtagtaaactcagctgtctacaggtttgct
tggttgggatgccttggattcagctttttgtgcttttgtgccaagagattccatgtatgg
ttcaccaacctccacaattctattcgtgatgaccgttatttgattggtcgtaggcttcat
aactacggggaacatgtaatggagagacaaaacgaggctgatgtgccctcagaaatgcag
aattctagttcacggggacctggttttatcctacatgaccgggaagctgatgtaggaatt
aggctaaggcatgttaatagacaagatgcctaa
DBGET
integrated database retrieval system
