Cornus florida (flowering dogwood): 132302579
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Entry
132302579 CDS
T11641
Name
(RefSeq) sm-like protein LSM36B
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
cflo Cornus florida (flowering dogwood)
Pathway
cflo03018
RNA degradation
cflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132302579
09123 Folding, sorting and degradation
03018 RNA degradation
132302579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cflo03019
]
132302579
03041 Spliceosome [BR:
cflo03041
]
132302579
Messenger RNA biogenesis [BR:
cflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132302579
mRNA degradation factors
5'-3' decay
Lsm complex
132302579
Spliceosome [BR:
cflo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132302579
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
132302579
NCBI-ProteinID:
XP_059655470
LinkDB
All DBs
Position
Unknown
AA seq
91 aa
AA seq
DB search
MSGTAEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTSKRTLADGA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaacagcagagaaaggttctggaacaacaaaaacgccagctgattttttgaaa
tcgattcgtggccgacctgttgttgtcaaattgaattctggtgttgattatcgaggtatt
cttgcttgtctggatggatatatgaatattgctatggagcaaactgaagaatacgtcaat
gggcagctgaaaaataaatacggtgatgcgtttattcgaggaaataatgtgctttacatc
agtacatcaaagaggacactggcagatggtgcttag
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