Cornus florida (flowering dogwood): 132307084
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Entry
132307084 CDS
T11641
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
cflo Cornus florida (flowering dogwood)
Pathway
cflo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
132307084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cflo04121
]
132307084
Enzymes [BR:
cflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132307084
Ubiquitin system [BR:
cflo04121
]
Ubiquitin ligases (E3)
U-box type E3
132307084
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PUB10_N
Arm
ARM_PUB
U-box
ARM_ARMC5
PUB2_N
MLKL_N
HEAT_2
Arm_2
zf-RING_UBOX
zf-C3HC4_4
MCAfunc
zf-Nse
HEAT_EZ
KAP
zf-C3HC4_2
Neurochondrin
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
132307084
NCBI-ProteinID:
XP_059660729
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MEDERGALIQKLIDIVNEISTISDYRCTVKKQYCNLARRLKLLTPMLEEIRDSKDLVPEE
SFKALTSLKEALESARDLLRFGSEGSKIYLVLERDQIMNRFQEVTTHLEQALGGVSYEKL
DISDEVKEQVELVLSQFRRAKGRVDAPDVELYEDLLTLYLYNKINDSAVDPDYPVLLRRL
AEKLQLKGITDLTQESLALHEMVLSVGGDPGERIEKMSMLLKRIKDFMLTEILDMDPPTT
EKSIPSGCAGEASMEGIHKSPVIPDDFRCPISLELMTDPVIVSTGQTYERSCIEKWLEAG
HGTCPKTQQTLTSTALTPNYVLRSLIAQWCEANGVEPPKRPSPRPRKISACSPAERKKIE
SLLCKLTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEVGAIPLLVGLLSTPDSRTQEHAV
TALLNLSICEDNKGSIMSAVPGIVQVLKKGSMEARENAAATLFSLSVVDENKVTIGSIGA
IPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLVTEPHGGMVDEA
LAILAILSSHHEGKAAIGAAEAVPFLVEVIGTGSPRNKENAAAVLVHLCGGDQHHMVEAQ
ELGVMGPLVDLAQNGTERGKRKAAQLLERMNRFVEQQKLAQAQAETQVQTQSHN
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagagaggagctctaatccagaagctaatcgacatcgtcaatgaaatatca
acaatctcagactatcggtgtacggtcaaaaagcagtactgtaatctagcgaggagattg
aagctgttgactccaatgttggaagagattagagatagcaaggatttagttcctgaagag
tccttcaaagctttgacctctttgaaggaggctttggaatccgctagagacttgctcagg
ttcggaagtgaaggaagcaagatttacctggtcctagaaagggatcaaattatgaataga
ttccaagaagtcacaacccacttggaacaagctttgggtggagtttcctatgaaaaactt
gacatatcagacgaagttaaggaacaggttgagcttgttctttctcagttcagaagagct
aaagggagggtagatgcacctgatgttgagctatatgaagatttgctaaccctttacctt
tacaacaagatcaatgattcagctgtagatccagactatccagttctcttaaggagattg
gctgaaaagttacaattaaagggtataactgacctcacccaagaatcactagctttacat
gagatggttttatccgtaggtggagatccaggggaaagaatagagaagatgtcaatgcta
ctgaaaagaattaaagattttatgctgacagagattttggacatggatcctcctacaact
gagaagtctattccttcaggttgtgctggagaagcatccatggaaggaattcacaagtca
ccggttataccggatgattttcgctgtccaatatccctcgagttgatgacggatcccgtc
attgtatcaacagggcagacctatgagcgttcctgcatcgagaaatggttggaggcaggg
catggcacttgtccaaagacacaacaaaccctcactagcactgccctcacacccaactat
gttttacgtagcctcatagcccagtggtgcgaggcaaatggggttgaaccaccaaaacga
cccagccctcggcccaggaagatatctgcatgctcacctgctgaacgtaaaaagatagaa
tctctcctttgtaagcttacatctggcaaccccgaagatcagcgatctgctgcaggggaa
atacgccttcttgccaagcgcaatgctgataatcgtgtggccattgctgaagttggtgcc
atccctcttcttgttggcctcctttcaacacctgattcccgcactcaagagcatgctgtc
acagcgcttcttaatctttccatatgtgaggataacaaaggaagcatcatgtcggcagtg
cctggtatagtccaggtgctcaagaagggaagcatggaagcaagggaaaatgcagcggcc
accctatttagcctgtcagttgtggatgaaaataaggttactattggttctataggagca
atcccgccacttgtgacactgcttagtgaaggtactcaaaggggtaagaaggatgctgca
acagcactcttcaacttgtgcatataccaagggaacaagggaaaggcagtgagggctgga
gttgtgcccacgctgatgcggctggtgacagaacctcatggtgggatggtggatgaggcc
ctagccatactagcgatactgtctagccatcatgaagggaaggcagccatcggagctgca
gaagcagtgccatttttggtagaggttattgggactgggtctccacggaacaaagagaat
gcagctgcagttttggtgcacctttgtggtggagaccaacatcatatggtagaggctcag
gaactgggagtgatgggtccactggtggatttagcacaaaatggcacggaaaggggcaag
cggaaggctgcacagttgcttgaacgtatgaatagatttgtcgagcagcagaagctagca
caggcccaagctgagactcaagttcagactcagagtcacaactag
DBGET
integrated database retrieval system
