Cornus florida (flowering dogwood): 132313030
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Entry
132313030 CDS
T11641
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cflo
Cornus florida (flowering dogwood)
Pathway
cflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132313030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cflo03019
]
132313030
03009 Ribosome biogenesis [BR:
cflo03009
]
132313030
04131 Membrane trafficking [BR:
cflo04131
]
132313030
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cflo04147
]
132313030
Messenger RNA biogenesis [BR:
cflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132313030
Ribosome biogenesis [BR:
cflo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132313030
Membrane trafficking [BR:
cflo04131
]
SNARE
SNARE associated proteins
Others
132313030
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132313030
Exosome [BR:
cflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132313030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_33
AAA_5
AAA_2
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
nSTAND_NTPase5
ABC_tran
Viral_helicase1
NB-ARC
AAA_7
AAA_lid_PRS2_C
Vps4_C
IstB_IS21
TsaE
NACHT
Zeta_toxin
AAA_24
DUF815
Zot
Motif
Other DBs
NCBI-GeneID:
132313030
NCBI-ProteinID:
XP_059667625
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MSNQAESSDAKGTKRDFSTAILERKKAANRLVVDEAVNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNCNW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEQDIERERRRRDN
PEAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFSE
TSAGTTGTDPFAASAGGADEDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccaagctgaatcgtccgatgctaaggggaccaagagggattttagtactgcg
attctcgaacgcaagaaggcggccaatcggctcgtcgtcgatgaagcagtcaacgatgat
aattccgtcgttgctctgcatcccgatacaatggagaagcttcagctattccgcggtgac
acgatcttaatcaagggcaagaaaaggaaagatacaatctgcattgcccttgctgatgaa
acctgtgatgaaccaaagattaggatgaacaaagttgttagatcaaacctgagggtcagg
cttggggatgtagtttctgtgcatcagtgtgccgatgtcaaatatgggaagcgtgtccac
attctccctgtggatgataccattgaaggggtcactgggaatctgtttgatgcgtacttg
aaaccttatttcctagaggcataccgcccagtgaggaagggcgacctctttcttgtaagg
ggaggaatgagaagtgtggaattcaaagttattgagactgatccaccagagtactgtgtg
gttgcccccgacactgagatcttctgcgagggagagcctgtgagaagggaggatgaggat
agattagacgaggttggttatgatgatgttggtggtgtccgtaaacagatggcacagatt
cgggagttggtggagttgccattgaggcatccacaactctttaaatcaattggtgtgaaa
ccacctaaagggattttgttatatggacctccaggatctggaaagactttaatagcaaga
gctgttgctaatgaaactggtgcttttttcttttgtataaatggaccggagatcatgtca
aagttggctggagagagcgaaagcaatctcaggaaagcatttgaggaagcagagaagaat
gctccatccattatttttattgatgagattgattctattgctcccaagcgagagaaaact
catggagaagttgagaggaggattgtttcccagcttttgactcttatggatggtcttaag
tcccgtgctcatgttattgtcattggtgccacaaatcgtcccaacagcattgaccctgcc
ctgagaaggtttggtagatttgatagggaaatagatattggtgttccagatgaggttggg
cgtcttgaggttcttcgcatccatacgaagaacatgaagctcgctgaagatgttgattta
gaaaaaattgccaaagacacacatggatatgttggcgctgatttagcagctttgtgcact
gaggctgcactccaatgcatcagagagaagatggacgtgattgacttggaagatgagtcc
atagatgctgagatactcaactctatggctgtttcgaatgagcacttccaaactgctctt
ggaacaagcaatccatctgctctgcgagaaacagttgttgaagtgcccaattgcaattgg
gaagatatcggaggccttgagaatgtcaagcgggagcttcaagagaccgttcaatatcct
gtggagcatcctgagaagtttgagaagtttggtatgtcaccctcaaagggagttcttttc
tatggcccaccaggatgtgggaaaactcttctggccaaggctattgccaatgaatgtcag
gcaaactttatcagtatcaagggtcctgaattgcttaccatgtggttcggggagagtgag
gccaatgttagagaaatattcgacaaggctcgtggatctgctccttgtgtcctattcttt
gatgagctcgactcaattgctacccagaggggaagcagtgtaggagatgctggaggagct
gctgatagggttttgaatcaactcctgactgaaatggatggaatgtctgccaagaaaact
gttttcattattggagccaccaacaggccagatattattgatcctgcacttttgcggcct
ggccgtcttgatcaattgatttatatccctttgcctgatgaagattctcggcatcagatt
ttcaaggcttgccttaggaaatctcctgtttccaaagatgtagacctgagagcccttgcc
aagtacacccaaggcttcagtggtgccgatattacggaaatatgccaacgtgcctgcaaa
tatgccataagggagaacattgagcaggacatcgagagggagaggaggagaagggataat
cccgaggctatggaggaggatgtagaagatgaggtggcggagatcaaggccgctcatttt
gaggaatcaatgaagtatgcgcgtaggagtgtgagtgatgctgacattcgcaagtaccag
gcgtttgctcaaacattgcagcagtctagagggttcggtaccgaattccgattctcagag
accagtgcagggactactggaactgacccttttgcagcctctgctggtggggctgacgaa
gatgacctatatagttag
DBGET
integrated database retrieval system
