Cornus florida (flowering dogwood): 132313627
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Entry
132313627 CDS
T11641
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cflo Cornus florida (flowering dogwood)
Pathway
cflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132313627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cflo03021
]
132313627
03019 Messenger RNA biogenesis [BR:
cflo03019
]
132313627
Transcription machinery [BR:
cflo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132313627
Messenger RNA biogenesis [BR:
cflo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132313627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
132313627
NCBI-ProteinID:
XP_059668469
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MDDGEGGLSFDFEGGLDTGPSNPTASVPAIQSDAAVTVAANSSVVTTSADPVAGNLPGRR
SFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIKE
CNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLAYNYGNSNRFFQNRNANYSQQ
TERTQFPQGSNAYSQSAPAKPSTTESPNMQQQQVQQSQQQVNQAQIQNLPNDQQNQVNKI
STPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDTVENVILIFSVNRT
RHFQGCAKMTCKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNEN
LPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVNPDNGTENP
DIVPFEDNEEEEEEESEEEDESFGQGFGATAQGRGRGRGMIWPPHMPLARGARPLPGMRG
FPPVMMGPDGFSYGAVTPDGFPMPDLFGMGPRAFGPYGPRFPGDFTGAASGMMFHGRPSQ
PGNFQAGGFGMMMGQGRGPFMGGMGIGAAGPARAGRPVGMPPLFPPPPSQPSQNSNRMVK
RDQRAPVNDRNDRYSAGSDQGKGQDMAGSGGGGVDEDTQYHQGVKIDQEDQFGSGNNFRN
DESESEDEAPRRSRHGEGKKKRRSSEADATTSSNQQIQ
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggacgacggggaaggaggtctaagcttcgactttgagggcggcctcgatacgggtccc
agcaaccccactgcatccgtaccggcaatacaatccgatgcagcagtcacggtggcggct
aacagctctgtcgtgaccacctccgctgacccggtggcgggcaacctaccggggcggcgg
agtttccgtcagaccgtgtgccggcattggctgcgaagcctttgtatgaagggtgacgct
tgcgggtttctccaccagtatgacaagtctagaatgccggtgtgccggttctttcgattg
tacggcgagtgtcgggagcaagattgtgtgtataagcacactaacgaagatatcaaggag
tgcaacatgtacaagttggggttttgtccaaatggtcccgattgccggtataggcatgca
aagctgcctggtcctccacctcctgtcgaagaagtgctccagaagatccagcatctggct
tacaattatggcaactcaaataggttcttccaaaaccggaatgctaactattctcagcaa
acagaaagaactcagtttccacagggctccaatgcttatagtcaaagtgcacctgcaaaa
ccttcaacaacagagtcccctaatatgcagcaacaacaagttcaacagtcccaacagcaa
gtcaaccaggcccaaatacagaatcttcccaatgaccagcaaaatcaagtgaataaaatt
tctacacccctgcctcaaggaatatctaggtattttattgtcaaaagttgcaaccgtgag
aacctggaattatcagtacaacaaggagtatgggcaacccaaagaagcaacgaggccaaa
ttaaatgaagcttttgacactgttgaaaatgttattttgatcttttcagtcaaccggact
cgacattttcagggttgtgcaaagatgacatgtaaaattggtggctctgttggtggaggg
aactggaagtatgcacatggaactgctcattatgggcgaaatttctctgtcaaatggtta
aagctgtgtgaactttcctttcacaaaactcgccatttgaggaacccttacaatgagaac
ttaccagtgaagataagcagagactgccaggaacttgagccctctattggtgagcagttg
gcttcccttctctatcttgagccagatagtgaactgatggcaatctcagttgcagcagaa
tcaaagagagaggaggaaaaagcaaagggagtcaatccggacaatgggactgagaacccg
gacattgtcccgtttgaggacaatgaagaggaggaagaggaagaaagcgaggaagaggac
gagagctttggccagggatttggggcaacagctcaaggcagaggaaggggcagaggcatg
atatggcctcctcatatgcctttagcacgtggggccaggcctctgcctggtatgcggggc
ttcccacctgtcatgatgggtcctgatggattttcttatggagctgtcacacctgatggg
tttcccatgcctgatctttttggtatgggtccccgtgcttttggaccatatggtccaaga
ttccctggtgactttacaggtgctgcatctggcatgatgtttcatggccgaccttcccag
cctggaaattttcaagctggtggatttgggatgatgatgggtcaaggacgaggccctttc
atgggtggaatgggtattggggctgcaggcccagctagagctggtcggccagttggtatg
ccaccattgtttccaccaccaccatcacagccctctcagaactcaaacaggatggttaag
agggatcaaagagcaccagtgaatgatcggaatgacagatacagtgcagggtcagatcag
ggcaagggtcaagatatggcaggttcaggtggtggtggggttgatgaagacacacaatat
caccaaggagtaaagattgaccaagaggatcaatttggctctggaaacaacttcagaaat
gatgaaagtgaaagcgaggatgaggcaccaagaaggtcaagacatggggagggaaagaag
aagagacgaagctcggaggcagatgccaccaccagctctaatcagcagatccagtga
DBGET
integrated database retrieval system
