KEGG   Chryseobacterium fluminis: ODZ84_02250
Entry
ODZ84_02250       CDS       T09749                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cflu  Chryseobacterium fluminis
Brite
KEGG Orthology (KO) [BR:cflu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cflu03400]
    ODZ84_02250
Enzymes [BR:cflu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ODZ84_02250
    5.6.2.6  RNA 3'-5' helicase
     ODZ84_02250
DNA repair and recombination proteins [BR:cflu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ODZ84_02250
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Ints3_N DUF7516
Other DBs
NCBI-ProteinID: UZT98412
LinkDB
Position
complement(483143..485596)
AA seq 817 aa
MAAFENTDGFKIILQWMADKGNVPFKFQTDTWKKFGNGYSGMVVAPTGFGKTYSVFLGLI
SDFLNHPEKYKDGLKMIWITPLRSLSKDIAKAMQEAIDEIGLDWTVGVRNGDTDPKVRQQ
QVRNMPEILVATPESLHLLLGQKNHDRFFQNLQSIVIDEWHELLGSKRGILVELGISQLR
KYVPKLKIWGISATIGNLDEAMDVLIPYAIKKTKITAKEHKKIDIIPVFPDEVEILPWAG
HLGHKLADKVVPIILESNSTIVFTNTRSQSEMWYQLLLDAYPDFAGQIAIHHSSIDAHLR
IWIEENLSNGKLKAVVSTSSLDLGIDFKPVDTVIQIGSAKGVARFLQRAGRSGHSPFETS
KIYCVPTHSLELIEVAALKEAIKQNVIEPREPQVLCFDILVQFLMTLAIGDGFYPQDTYE
RIKQVYTFQEMTAGEWKNILDFLTLGGSVLQGYEEYHKVVVMEDGLFKVTSRKIAMLHRM
NMGAIVSDAMLKVKFISGGYIGMVEEYFISRLKKEEKFILAGRVLEIAMVKDMTVYVRSS
KGKALAPSYLGGRLPLSTNLGRFLREKLSGALNPKASEKELKFLHPLLINQEKRSHIPKE
DEFLVELIKNREGYHLFMYPFEGRLVHEVMAALIAYRISKLAPISFSMAMNDYGFELFSD
KEIPLNDDNLHKILTRENLMIDVISSINSAEMARRKFRDIAVISGMVIQNLPGQQRSNKA
LQSSAGLIFKVLEDHDPNHFLVRQAYTEVFNMQLQEQRLVEAFKRIEKSKIILKFANTFT
PLSFPIKVDSLRQTLTSESLDARIQKLIKQSGRNITD
NT seq 2454 nt   +upstreamnt  +downstreamnt
ttggcagcttttgaaaataccgacgggtttaagatcattcttcaatggatggcagataaa
ggtaatgtcccctttaaatttcagaccgatacctggaaaaaattcggaaatggctacagc
ggaatggttgttgcgcctacaggctttggaaaaacctattctgttttcctgggcctaatt
tcagattttttgaatcatcctgaaaaatataaggatggtctcaaaatgatctggatcact
cccctccggtcgctttcaaaagatatcgctaaagctatgcaggaggcaatagacgaaatt
ggactggattggacggttggggtcagaaatggagatacagatcccaaagtaagacagcag
caggtcagaaacatgccggagatattagtcgccaccccggaaagtttacatttgcttctc
ggacagaaaaatcatgaccggttttttcagaacctgcagagcatcgtgatcgatgaatgg
cacgaactgctaggctcgaaacgaggtatcctggtggagttaggcatttcacaactccga
aagtacgttccgaagcttaagatctggggaatctcggcaaccatcggaaaccttgatgaa
gctatggatgtacttattccatacgcaattaagaaaacaaagatcactgccaaagaacat
aaaaagatcgatattattcccgtgtttcctgacgaagttgaaattcttccgtgggcagga
caccttgggcacaaacttgcagataaagtagtaccgattattttagaatccaattccacc
attgttttcaccaatacccggagccagagtgaaatgtggtatcagctgctgctggacgcc
taccctgattttgcaggtcagattgccattcaccacagttctattgatgcgcatttaagg
atctggattgaggaaaatctgagcaatgggaaattaaaagcagtagtttctacctcatca
ttagatttaggaatcgatttcaagcccgtagacactgtgatacagatcggttctgcaaaa
ggagtagcccggtttttacagagagcaggacgaagcgggcactccccttttgaaacctca
aaaatttactgtgttcctacgcattctctggaactgatcgaggtggctgcgctgaaagaa
gccattaaacagaatgtgatcgagccccgggaacctcaggtattatgttttgatatactg
gttcagtttttaatgactctggctattggagacggtttttatcctcaggatacctatgaa
aggataaaacaggtatatacattccaggaaatgaccgccggcgagtggaaaaatattctt
gattttctcacgttgggcggaagcgtcctgcaaggttatgaagaataccataaagtagtg
gtcatggaggacggactgtttaaagtaacatcaagaaagatcgcgatgcttcaccggatg
aacatgggcgctatcgtaagcgatgccatgctgaaagtgaagtttatttcaggaggatac
atcggtatggtagaggaatattttatttcaagattaaaaaaagaggaaaaatttatactg
gcaggccgtgtacttgagatcgcgatggtaaaagatatgactgtttatgtgcggtcatcc
aaaggaaaagctttagctccgagctatttgggaggcagattaccgctaagtaccaattta
ggtcgttttttgagagaaaaactttcaggagcgctcaatcccaaggcttctgaaaaagag
ctcaaattcttacatcccctgttaatcaaccaggagaaacgttctcatatccccaaagaa
gatgaatttctggtggaactgattaaaaaccgggaaggttaccacctgtttatgtatcct
tttgaaggacgtctcgtccatgaagtaatggctgcactgatcgcctaccggatttcaaaa
ctggctcctatctcgttttccatggcgatgaatgattatggttttgaattattcagcgat
aaagaaattcctctgaatgatgataacctgcataaaattttaacccgggaaaacctcatg
attgatgtcatttcaagcattaactctgcggaaatggcccgaagaaaattcagggacatt
gctgtcatttccggaatggtgattcagaatcttccggggcaacagcgttccaataaagcg
ctgcaaagttctgcagggcttattttcaaagtattggaagatcatgaccccaaccacttt
ctggtaagacaggcgtatacggaagtttttaatatgcagctgcaggaacagcgactggta
gaagccttcaaaagaattgaaaaatcaaaaattattctgaaatttgccaatacctttacc
cctttaagcttcccgattaaagttgacagtttacggcagaccctgaccagtgaaagtctt
gatgcaagaatacaaaaactgatcaaacaatccgggagaaatataacagattaa

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