Chryseobacterium fluminis: ODZ84_02685
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Entry
ODZ84_02685 CDS
T09749
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
cflu
Chryseobacterium fluminis
Pathway
cflu00541
Biosynthesis of various nucleotide sugars
cflu01100
Metabolic pathways
cflu01250
Biosynthesis of nucleotide sugars
Module
cflu_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ODZ84_02685 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cflu01005
]
ODZ84_02685 (kdsB)
Enzymes [BR:
cflu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
ODZ84_02685 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
cflu01005
]
Lipid A
ODZ84_02685 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Ribosomal_L27A
Motif
Other DBs
NCBI-ProteinID:
UZT98495
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Position
complement(579784..580506)
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AA seq
240 aa
AA seq
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MKIIAVIPARYEASRFPAKLMQMLGEKTVIITTYQNVVETGLFDEVFVATDSEIIFNEIV
NNGGKAVMTGPHETGSDRIAEAVQNIDCDIVINVQGDEPFLKLEPLQQLIDVFKADENQE
ISLASLKIRLTEKEEIENPNNVKVITDNNGFALYFSRSVIPFHREISYQIDYFKHIGVYA
FRKHALLQFSKLEMKPLEISEKIECIRYLEYGMKIKLIETNFIGVGIDTPEDLEKARKLI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaagattatagcagttattccagcacgttatgaagccagtcgctttccggctaagctt
atgcaaatgttaggcgagaaaaccgttattataacaacttatcagaacgttgtggaaaca
ggtttgtttgatgaagtttttgtagctacagattcagaaattatttttaatgaaatcgta
aacaacggcggaaaagcagtaatgaccggaccacatgaaacaggcagtgaccggatcgca
gaggcggtgcaaaatattgactgtgatattgtgattaacgttcagggtgacgaacctttt
ttaaaattagaacctctgcaacaattaattgacgtttttaaggcggatgaaaatcaggag
atttcattagcatcattaaaaatcagacttacggaaaaggaagaaattgaaaaccctaat
aatgtaaaagttatcacggataataatggtttcgccctatatttcagccgttctgtaatt
ccttttcacagagaaatttcttatcagatcgattatttcaagcatatcggcgtgtacgct
ttcagaaagcatgccttattacaattttcaaaactggaaatgaagcccttggaaatttct
gaaaaaatagaatgcatccgttatcttgaatatggcatgaaaatcaagctgatagaaact
aatttcatcggagttggtatcgatactcctgaagatctggagaaagccagaaagttaatt
tga
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