Chryseobacterium fluminis: ODZ84_07550
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Entry
ODZ84_07550 CDS
T09749
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cflu
Chryseobacterium fluminis
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cflu03032
]
ODZ84_07550
03400 DNA repair and recombination proteins [BR:
cflu03400
]
ODZ84_07550
Enzymes [BR:
cflu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ODZ84_07550
DNA replication proteins [BR:
cflu03032
]
Prokaryotic type
DNA Topoisomerases
ODZ84_07550
DNA repair and recombination proteins [BR:
cflu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ODZ84_07550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UZT99408
LinkDB
All DBs
Position
1716823..1717926
Genome browser
AA seq
367 aa
AA seq
DB search
MDNSELDIISHLKPSKIVKIMKDPEASAKAVNLIYTSDAESAGIIRKKKGKKYSYFKDGE
KIKDKDEIKRINGLVIPPAWENVWICALDNGHLQATGFDVKKRKQYRYHPLWSALRNHTK
FYRMLQFGYALPQMRLHIEQDLALRNFEKRKILALIVSLMQKTNIRIGNNAYEKLYGSFG
LTTLKGKHVKINGQKMTFSFKGKKGVMHNVNLKSRRLSRLVQKCKEIPGKELFQFYDDDG
NHHTIDSGMVNNYIKEISGEDFTAKDFRTWSGTVNALIAFKEIGYAETNTEYKKKVKEAL
ERVASHLGNTSTVCRKYYVHPLVINLYENNTIKKYLDELEQIEENDGKADLTQQEKLVLK
ILETEKM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggataattcagaattagacattatttcccatctgaaaccttctaagattgtcaagatt
atgaaagatccggaggcttctgcaaaggcggtaaatcttatttacacgtccgatgcagaa
tctgccggtatcatccggaaaaagaaaggaaaaaaatattcttacttcaaggatggtgaa
aaaataaaagacaaagatgagatcaagcgtatcaacggactggttattcctccggcgtgg
gaaaatgtatggatctgtgccttagacaacgggcatcttcaggcgacgggttttgatgta
aaaaagagaaaacagtaccgatatcatccactttggagtgcccttagaaatcatacaaaa
ttttacaggatgctgcagtttggctatgccttaccgcagatgagactgcatatcgaacag
gatctggctttaagaaattttgaaaaaagaaaaattttagcgttaatcgtaagtttaatg
cagaaaacgaatatccggattggaaacaatgcatatgaaaagttatacggatcattcgga
ttaaccactttaaaaggaaagcacgtaaagataaacggccagaaaatgactttttctttc
aaagggaaaaagggcgttatgcataatgttaatcttaaaagcagaagactgtccagattg
gttcagaaatgtaaggagattccgggaaaagaactgtttcagttttatgatgacgatggc
aatcaccatacgatcgattccggaatggtgaataactacatcaaggaaatcagcggtgaa
gattttacggcaaaagatttcagaacctggtccggaaccgtcaatgcactgattgctttt
aaagagatcggttatgcggaaaccaataccgaatacaaaaagaaggtgaaagaagccctg
gaaagggtcgcctcccatctgggaaataccagtaccgtgtgcagaaaatattacgttcat
cctctggtgatcaacctttatgagaacaataccatcaaaaaatatcttgacgagcttgaa
cagatcgaagagaatgacggcaaggctgatttaacccaacaggaaaaattagttcttaaa
attctggaaacggaaaagatgtaa
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