Chryseobacterium fluminis: ODZ84_08225
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Entry
ODZ84_08225 CDS
T09749
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cflu
Chryseobacterium fluminis
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cflu02000
]
ODZ84_08225
Transporters [BR:
cflu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ODZ84_08225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_12
TPR_8
TPR_2
TPR_7
DUF3601
Motif
Other DBs
NCBI-ProteinID:
UZT99535
LinkDB
All DBs
Position
complement(1856139..1857617)
Genome browser
AA seq
492 aa
AA seq
DB search
MKKIVNISILSLTTLFLHQCSDERFDILPNSQDAPSTIFTTEANYRLVLDGAYDAFKSPT
YYNGDTGSSIILGDVLADNLILNTQGRQSNKSAYEWSYNPQTGAVTALYSSAYFVISRAN
TILDNLNKVPYTDYMKNIEAEAKAIRAIAHFDLVRAYAKIPTQSSDASSSLGIAYVTTFD
PNIKPSRDATVSITYDKIIADLQDALAKINTSNETNGRLNKTSVLGFLSRVYLYKGDYDK
VIEFGEQCISAYPSVGRNANFVNIWRDATDDGELFTILNSNLNKDNVNVGVAYNQNVSGI
LSEYNVNYDLFTKYLDSDVRTSAYVLRADSDSTPFNHVVKHRTRIGSSVGQVVDIKFLRS
AEVYLNVAEAYMKASAPNPVRALQLLNILRAERYGTTASPYVPGTETGTDLLNAIYYERR
LELAFENDRFWTIKRLGQSVVRSDFGSAADGGGGDAPTGALKTLPAGNFRFVLPIPQDAI
NLNPNLIQNSGY
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatagttaacatatccatactttctttgacaacattgtttctacatcagtgt
agtgatgagaggtttgacattctgcctaacagtcaagatgcaccatcaacaatcttcaca
acagaagctaattatagattagttttagatggtgcctacgacgcgtttaaaagtccgact
tattacaacggtgatacggggagttccattatactaggagatgttctggctgataatctt
attttgaatacacagggaagacaatcaaataaatcggcctatgaatggtcatataatcct
cagacgggtgccgtcacagctttatattcgtctgcatactttgtaatttcaagggcaaat
acaatattggataacctcaataaagttccttacacagactatatgaaaaatatcgaagct
gaagcaaaagcgataagggcaattgcacattttgatctggtaagggcttatgcaaagatc
ccaacacaaagcagtgatgcttcttcgtcattaggtattgcctatgtcactacgtttgat
cccaatataaaaccatctagagatgccaccgtcagtatcacctatgataaaatcattgca
gacttacaagatgctttagcaaagataaatacaagcaatgaaacaaacggaagattgaac
aagacatctgtattaggatttttatcaagagtatatttatataaaggcgactacgataag
gttattgagttcggggagcagtgtatctcggcatatccttcagtagggaggaatgctaat
ttcgttaatatctggagagacgcaacggatgatggagaattatttaccattttaaactca
aacctaaataaagataatgtaaatgtaggggtagcgtataatcagaatgtatcaggaatt
ctttcagaatataatgtgaattatgatttatttacaaaatatctagattccgatgttcgg
acttctgcctatgttttaagagcagattctgattcgacaccatttaatcatgtggtaaaa
cacaggacaagaataggttcaagtgtaggccaggttgttgatattaaatttttacgatct
gcagaggtatatttaaacgttgcagaagcgtatatgaaagcttctgcccctaaccctgta
agagcacttcaattactgaatattttaagagctgaaagatatggtacaacagcttctcct
tacgttccgggtactgaaacaggaacagatttactgaacgccatttattatgagagaaga
ttggaactggcattcgaaaatgacagattctggaccataaaaagattgggacagtctgtt
gtaagatcagattttggatctgctgctgatggcggcggaggagatgctcctactggcgca
ttaaaaactcttccggcaggaaacttcagatttgtattaccaattcctcaagatgcaatt
aatttaaatccaaacttaattcaaaatagcggatattaa
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