Chryseobacterium fluminis: ODZ84_11720
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Entry
ODZ84_11720 CDS
T09749
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
cflu
Chryseobacterium fluminis
Pathway
cflu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ODZ84_11720 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cflu01007
]
ODZ84_11720 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cflu03016
]
ODZ84_11720 (aspS)
03029 Mitochondrial biogenesis [BR:
cflu03029
]
ODZ84_11720 (aspS)
Enzymes [BR:
cflu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
ODZ84_11720 (aspS)
Amino acid related enzymes [BR:
cflu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ODZ84_11720 (aspS)
Transfer RNA biogenesis [BR:
cflu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ODZ84_11720 (aspS)
Prokaryotic type
Other AARSs
ODZ84_11720 (aspS)
Mitochondrial biogenesis [BR:
cflu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
ODZ84_11720 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
tRNA-synt_2b
DUF4443
Motif
Other DBs
NCBI-ProteinID:
UZT95915
LinkDB
All DBs
Position
2567895..2569649
Genome browser
AA seq
584 aa
AA seq
DB search
MFRSHTNGELSLQHLNEKVTLSGWVQTIRDKGFMIWIDLRDRYGITQLVFDQDRSTAELM
ENAKKLGREFVIQVTGRVIERVSKNPNIPTGEIEILVEKLEVLNESQLPPFTIEDETDGG
EELRMKYRYLDIRRAPVRDKLIFRHKMAQKVRNYLSDEGFIEVETPVLIKSTPEGARDFV
VPSRMNPGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVEQEDVMNVFEGMTKTLIKDITGQEFGAFPRMTFADAMQKYGNDKPDIRFGMEFVELND
LVKGKDFKIFDEAELVVGINVEGCADYTRKQIDELVDWVKRPQIGASGMIWAKFQNDGVK
TSSVNKFYNEEDLSKIIDRFGAKEGDLMLILSGNEHKVRTQLSALRMELGNRLGLRKGDV
FAPLWVVDFPLLEFDEESGRYHAMHHPFTSPKPEDIHLLETDPGKARANAYDMVLNGNEI
GGGSIRIFDKELQSRMFDLLGFSKEEAEAQFGFLMNAFKYGAPPHGGLAFGFDRLVAILD
GNEVIRDYIAFPKNNSGRDVMIDAPAAIADEQLDELELRLNLKA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgatcgcacacaaacggagaattatctcttcaacatcttaatgaaaaagttaca
ctatcgggatgggtacagaccatccgcgataaaggatttatgatttggatagatcttcgg
gatcgttacggaattacccagcttgtttttgaccaggaccgttcgacagcggaattaatg
gaaaacgcaaaaaagctgggacgtgaatttgtcattcaggtaacaggacgtgttatcgaa
agagtaagcaaaaaccccaatattccaaccggagagattgaaattctggttgaaaaatta
gaagttcttaacgaatctcagcttcccccttttacgattgaggatgaaacggatggcggt
gaagaattaagaatgaaataccgatatctggatatcagaagagccccggtgagagataaa
ctgatcttccgtcacaagatggcgcaaaaggtaagaaattatctttcagatgaaggattt
attgaagttgaaactcctgttttaattaagtccactccggaaggagcgagagattttgtg
gtaccaagcaggatgaatcccggacagttttatgctcttccacaatctccacagaccttc
aaacaattgttgatggtaggtggaatggataaatatttccagatcgtgaaatgtttccgt
gatgaggaccttagagcagacaggcagccggaatttacacaaatcgactgtgaaatggcc
ttcgtagagcaggaagatgtcatgaatgtctttgaagggatgacgaaaacgctgattaaa
gatattacaggtcaggaattcggagcattcccaagaatgactttcgcagatgcgatgcag
aaatacggaaatgacaaaccggacatccgtttcggaatggagttcgtggaactgaacgac
ctggtaaagggaaaagatttcaaaatatttgatgaagctgaactggtagtcggaatcaat
gtagaaggatgtgcggattacacaagaaaacagatcgatgagctcgtggattgggtaaaa
agaccgcagatcggagcttcaggaatgatttgggcgaagttccagaatgatggggtaaaa
acttcttctgtgaataaattttacaacgaagaagatctatcgaaaatcatcgacagattc
ggagcaaaagaaggcgatctgatgttgatcctttccggaaacgagcataaggtgagaact
cagctttctgcattgagaatggagcttggaaaccgtttaggcttaagaaaaggggatgta
tttgctccactatgggtagtagattttccattattggagtttgatgaggaaagcggacgt
tatcacgcgatgcaccaccctttcacttctccgaaacctgaagatatccacttactggaa
actgatcccggaaaagcaagggccaacgcgtacgatatggtattgaacggaaacgaaatc
ggaggaggttctatcagaatttttgataaagaattgcagtcaagaatgtttgacctttta
ggattctccaaagaagaggcagaagcgcagttcggatttttaatgaacgccttcaaatac
ggagcaccgcctcacgggggtctggcattcggatttgaccgtctggtagctattcttgac
ggcaatgaagtcatcagagactatatcgcgttccctaagaataattccggacgggatgta
atgatcgatgcacctgcagctattgctgatgaacagctcgacgaattggaattacgattg
aatttaaaagcataa
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