Chryseobacterium fluminis: ODZ84_15060
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Entry
ODZ84_15060 CDS
T09749
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cflu
Chryseobacterium fluminis
Pathway
cflu03030
DNA replication
cflu03430
Mismatch repair
cflu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ODZ84_15060 (dnaE)
03430 Mismatch repair
ODZ84_15060 (dnaE)
03440 Homologous recombination
ODZ84_15060 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cflu03032
]
ODZ84_15060 (dnaE)
03400 DNA repair and recombination proteins [BR:
cflu03400
]
ODZ84_15060 (dnaE)
Enzymes [BR:
cflu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ODZ84_15060 (dnaE)
DNA replication proteins [BR:
cflu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ODZ84_15060 (dnaE)
DNA repair and recombination proteins [BR:
cflu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ODZ84_15060 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UZT96537
LinkDB
All DBs
Position
3281757..3284822
Genome browser
AA seq
1021 aa
AA seq
DB search
MFLNCHSFHSLRYGALSVEKLVQQAEALGIKELVLTDINTVTAIYDFKKVCEGKGIKPIA
GMEVRKESRLLYIAIAKEFSGIGEVNTIITAHNRNEEELSEAAPEFKNVFVIYPLHNIPE
RLRENEFIGIREEELNLLVRPELKKRISEMVVLHPVTFSTKEEYNLHRILRAIDNNTIIS
KLAEGNLCRKSEYFKSEKEMIHTFQHHPEIIRNTRFILNQCHFEFTYKEKGSTENKNKKY
YTQSREEDIELLTRLAYEGLEKRYGTNETARLRVETELKVISDLNFSAYFLITWDIVQHS
NRMGFMHVGRGSGANSIVSYCLGITDICPVELDLYFERFLNLNRTSPPDFDLDWSWQDRD
AILKYVFEKYGKEHVAFCGTNVEFKYRSIFREVGKAFGLPKEELDMLATKPPETHYSDKI
IKSVYKYGKLLEKYPNQRSMHACGILISEDPITNFTALERPPKGFPIAQFDMDVAEDIGL
EKFDILSQRGLGTIQDTVDLIRKTRGIDVDIRDTRLSKDEKKANEYLAIGKTIGCFYIES
PAMRGLLRRLKCDNYRILVAASSIIRPGVAQSGMMREYIFRHNHPDQFQYFHPIFEEHLK
ETYGIMVYQEDVIKIAQYFGNLSLADGDILRRAMSGKGRSIKKLREVKANFFKSCTDKGH
SLQLTAEAFRQIESFAGYSFCKAHSASYAVESYQSLYLKVYYPLEFMVSVINNQGGFYRT
EVYIHEARMSGGNIRVPCVNSSDLQTTLKGKEIFLGLMLLEGLETKIAHGIVEERERNGA
YSSLQDFIKRVPVGIETIQILIFIGAFGFTDKPKNELLVEARILLVNFKPENRGLMLIQE
PVQEFRLPELKREKFEDAFDEIELIGFPVSCSPFDLLQTQYRGSVFVKDLLRFHKKQVKM
MAYLISRKHVPTKKGEMYFGTWIDADGDYFDTAHFPDSLKQYDFQGGGCYLLLGTVEVDY
HFPTITIHKMAKMPMIPDPRYAYDKEKQYDIHRQIKEDVSMTNRKPYPQAHEIGLPRYKI
E
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaattgtcattcctttcacagcctccgttacggagctttatcggtagaaaaa
ctggtgcagcaggcggaggcgctgggtattaaagaattagtgctgacggatatcaatacg
gttaccgcgatttatgatttcaagaaagtgtgcgaaggaaaaggaattaaacccatcgca
ggaatggaagtcagaaaagagagcagattactttatattgccattgcaaaagaattttca
gggatcggtgaggtcaatacaataattacggcacacaaccgtaatgaagaagaactttct
gaagcagctcctgaatttaaaaacgtttttgtgatctacccgttacacaatattccggag
cgcttaagagaaaatgaattcataggaatccgcgaagaagagctgaatcttctggtgcgt
cccgagcttaaaaaaaggatttctgaaatggttgttctgcatcctgttaccttcagtacg
aaagaagaatacaacctgcacaggattttgagagcgatcgataataatacgattatttca
aagcttgccgaaggaaatctctgtcgcaagtcggagtattttaaatccgaaaaagagatg
attcatacctttcagcaccatccggagattattcggaatacccggtttattttaaaccaa
tgccattttgaatttacctataaagagaaaggaagcacagaaaataagaataaaaaatat
tatacccaatcccgggaagaagatatagaactgttgaccaggcttgcctacgaaggtctg
gagaaaagatatggtacaaacgaaacggcaagattaagagttgaaactgaattaaaagta
ataagtgaccttaatttctctgcctattttttgattacatgggatattgttcagcatagc
aacaggatgggatttatgcatgtgggaagaggaagcggggccaattccattgtgagttat
tgcctgggaatcacagatatctgtccggtggaacttgatctttattttgaacgctttctg
aatctcaaccgtacctcacctcctgattttgacctcgactggagctggcaggaccgcgat
gccattcttaaatatgtttttgaaaaatacggaaaagaacatgtggcattctgtggaacc
aatgtagaatttaagtaccggtcaattttcagggaagtgggaaaagccttcgggcttccg
aaagaagagctcgatatgctggcgacaaaaccaccggaaacgcattattctgataaaatc
ataaaatcggtgtataaatatgggaagcttctggaaaaatatccgaaccagcggagtatg
cacgcctgcggcattctgatctctgaagatcccattaccaattttaccgctttagaaagg
cccccgaagggattcccgattgcccagtttgatatggatgtggcggaagacattggtctt
gaaaaatttgatattctttctcagagagggttgggaaccatacaggatactgtagatctg
atcagaaaaacaagaggaattgatgttgatatccgcgatacaaggctttccaaagatgaa
aaaaaagccaatgaatatttagccatagggaaaacaatcggatgcttttatatagaatca
ccggccatgcgcggactactcagaagattaaaatgtgacaattacaggatactggttgcc
gcttcctctattatcagaccgggagtggcccagagtggcatgatgcgggaatacatcttc
aggcataatcatccggatcagtttcagtatttccaccccatatttgaggagcatctgaaa
gagacctatggcattatggtctatcaggaagatgtgattaaaattgcccagtatttcgga
aatctgtctctggctgacggagatattctgcggagagcaatgagtggaaaaggccgctcc
attaaaaaacttcgggaagtaaaagctaatttttttaaatcctgtaccgacaaagggcat
tcgcttcagttaacagccgaagcattccggcaaatagaatctttcgcagggtactctttc
tgtaaggcacattcggcatcgtatgcagtagaaagctatcagagtctatacctgaaggtc
tattatcctttggaatttatggtttcggtgatcaataaccagggaggattttaccggacc
gaagtctatattcatgaagcaagaatgtcgggaggcaatatccgggttccgtgtgtcaat
tccagtgatcttcagacaacactaaaaggaaaagagatctttttggggctgatgctcctg
gaaggcctggagaccaaaattgcgcacggaattgttgaggaacgggaaagaaacggggct
tattcctctttacaggactttattaaacgtgttcctgtcggtattgaaaccatacagatc
ctgatttttatcggggcattcggatttacggataaacctaaaaatgaactcctggtggaa
gccagaatactgctggtaaatttcaaacctgaaaacaggggacttatgttgattcaggag
cccgttcaggaatttcggcttcctgagttaaaaagagaaaagtttgaggatgcttttgat
gaaatcgaactgataggctttccggtttcatgcagcccgtttgatctgttgcagacccaa
tacagaggctcggtttttgtgaaagatctgttgaggttccataaaaaacaggtaaagatg
atggcctatctgatttccagaaaacatgtgccgactaagaaaggcgagatgtatttcgga
acctggattgatgcggacggtgattattttgatacggcccactttccggatagcctgaaa
caatatgattttcagggtggaggatgctacttacttttaggaacggtagaagtagattat
cattttccgaccattaccattcataagatggcgaagatgcccatgatcccggatccccgg
tatgcttacgataaagaaaagcaatatgatattcaccggcagattaaggaagatgtaagc
atgactaatagaaaaccctatcctcaggcccatgagatcggattgccacgatataagata
gaatag
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