Chryseobacterium fluminis: ODZ84_15780
Help
Entry
ODZ84_15780 CDS
T09749
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cflu
Chryseobacterium fluminis
Pathway
cflu00521
Streptomycin biosynthesis
cflu00523
Polyketide sugar unit biosynthesis
cflu00525
Acarbose and validamycin biosynthesis
cflu00541
Biosynthesis of various nucleotide sugars
cflu01100
Metabolic pathways
cflu01110
Biosynthesis of secondary metabolites
cflu01250
Biosynthesis of nucleotide sugars
Module
cflu_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ODZ84_15780 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ODZ84_15780 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ODZ84_15780 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ODZ84_15780 (rfbB)
00525 Acarbose and validamycin biosynthesis
ODZ84_15780 (rfbB)
Enzymes [BR:
cflu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ODZ84_15780 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
Sacchrp_dh_NADP
KR
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
UZT96676
LinkDB
All DBs
Position
complement(3448132..3449211)
Genome browser
AA seq
359 aa
AA seq
DB search
MKNIIITGGAGFIGSHVVREFVKNNPESTIINLDALTYAGNLENLKDIENEPNYVFEKAD
ITKPEELRKVFEKYNPDAVVHLAAESHVDRSITDPMAFINTNVNGTANLLNLCKEFWTLN
PDHTHGRFPDEKRTNLFYHVSTDEVYGSLGETGFFLETTAYDPQSPYSASKAASDHLVRA
YGNTYGMPFIISNCSNNYGPNHFPEKLIPLCISNIINERPLPIYGDGKYTRDWLFVIDHA
KGIHQIFNEAKTGETYNIGGFNEWQNIDLVKELIRQMDEKLGRPQGHSEKLITYVKDRPG
HDKRYAIDATKLNSELGWKPSVTFEEGLGKTIDWYLENKEWLEHVTSGDYQKYYDKQYN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatataatcattactggaggagcaggatttatcggctcgcatgtggtaagagaa
tttgtaaaaaacaatccggaatctaccatcatcaaccttgatgcgctgacgtatgccgga
aatctcgaaaacctgaaggatatcgaaaacgaacctaattatgttttcgaaaaagcagac
atcacaaaacccgaagaattaagaaaagtatttgaaaaatataatccggacgccgtggtt
cacctggctgcagaaagccacgttgacagaagtattacggatcctatggcattcattaat
acgaatgtaaacggtacggccaatcttctgaatctctgtaaggaattctggacgttaaat
ccggatcacacccacggaagatttcctgatgagaaaagaacaaatcttttctaccacgtt
tctacagatgaagtctatggaagccttggggaaacaggattctttttagaaactacggca
tatgatccacagtctccgtattcagcttccaaggctgcttctgaccacttagtaagagcg
tacgggaacacgtacggaatgccgtttattatttcgaactgttctaataattacggtccg
aatcactttcctgaaaaactgattcctctgtgtatttcaaatatcatcaacgagagacct
ttgccgatctacggtgacggaaaatacaccagagactggttattcgtcatcgaccatgct
aagggcatccaccagatttttaacgaagcaaagacaggagaaacttacaatatcggcgga
ttcaatgaatggcagaatatcgacctggtaaaagaacttatcagacagatggatgagaag
ctcggaagacctcaagggcattcagaaaagttaatcacttatgtaaaagacagaccgggc
catgacaaacgttacgcgatcgatgcaacgaaattaaattccgaattgggatggaagcct
tccgtaacttttgaagagggcttaggaaaaaccatcgactggtatcttgagaacaaggaa
tggctggaacatgtaacgagtggtgattaccagaaatattacgataaacaatacaactaa
DBGET
integrated database retrieval system