Chryseobacterium fluminis: ODZ84_16400
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Entry
ODZ84_16400 CDS
T09749
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cflu
Chryseobacterium fluminis
Pathway
cflu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ODZ84_16400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cflu03021
]
ODZ84_16400
03400 DNA repair and recombination proteins [BR:
cflu03400
]
ODZ84_16400
Enzymes [BR:
cflu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ODZ84_16400
Transcription machinery [BR:
cflu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ODZ84_16400
DNA repair and recombination proteins [BR:
cflu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ODZ84_16400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UZT96789
LinkDB
All DBs
Position
3575869..3576864
Genome browser
AA seq
331 aa
AA seq
DB search
MAILQFIKPDKVILLNSDEFKGQFEFRPLEPGFGLTIGNALRRVLLSSLEGYAISSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQVRLKATAENQTNEQVIAKVSGQNVITAGDLGKSIN
GFEILNPELVICNLNSDVTFEITFNIEKGRGYVPSEQNKSNNAPVGTIAIDSIFTPIKKV
QYSIENYRVEQKTDYEKLVLDIETDGSISPQNALTEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLADMDLSVRALNCLKAAEVETLGELVSYSKSDLMKFRNFG
KKSLTELEELVHSKGLNFGFDVAKYKLDADK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttacaattcataaaacccgataaagtaattttacttaactctgatgaattt
aaaggtcaattcgaattcagacctctagaaccaggtttcgggcttacaatcggtaatgct
ttgagaagagtgttgctttcttctctggaaggatacgctatttcatctatcaaaatagaa
ggtgtagagcacgaattttcaactattccgggagtaatcgaagacgttaccgaaattatt
cttaaccttaaacaggtaagattaaaagctacggcagaaaaccagacgaatgagcaggtg
attgccaaagtttcgggtcaaaacgttattactgctggagatttaggtaaatcaatcaac
ggatttgagatcttgaatcctgagttggttatttgtaacctgaacagtgatgtaactttc
gaaattaccttcaatattgaaaaaggtagaggatatgttccttcagaacaaaataagtca
aacaatgcaccggtaggtactattgctattgactctatttttacacccattaagaaagta
cagtatagtattgaaaattaccgtgtagagcaaaaaacagactacgaaaaacttgtatta
gatatagagactgatggatctatcagccctcaaaatgctttaactgaagcttcgaagata
ttaatttatcacttcatgctgttctccgatgagagaatcacgcttgaaacagaagcagta
aaagcatcgatccagtacgatgaagaaacacttcatacaagacaactccttaagtctaaa
ttagcagatatggatctttccgtaagagccctgaactgtctgaaagcggctgaagtagaa
acgcttggagaattggtttcttacagtaagtctgatttgatgaaattcagaaattttggt
aaaaaatctttgacagaactagaagaattagtgcattcaaaaggtcttaacttcggtttc
gacgttgcaaaatataagttagacgctgataaataa
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