Chryseobacterium fluminis: ODZ84_16420
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Entry
ODZ84_16420 CDS
T09749
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
cflu
Chryseobacterium fluminis
Pathway
cflu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ODZ84_16420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cflu02022
]
ODZ84_16420
Two-component system [BR:
cflu02022
]
NarL family
LiaS-LiaR (cell wall stress response)
ODZ84_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4
Sigma70_r4_2
TadZ-like_ARD
Motif
Other DBs
NCBI-ProteinID:
UZT96793
LinkDB
All DBs
Position
3580417..3581049
Genome browser
AA seq
210 aa
AA seq
DB search
MSISIVIVEDEKNYNNALKKVINYQDDMKVVAQFFNGSEAIENLIEISPDVVMMDIQLQD
MLGIEIIDKLRKEMPETQFIMCTSFDDDEKIFNSLKAGATGYLIKGESMDKILASIRDVY
NGGAPMSSSIARKVLNHFERKNSVVKDIDELTDREKEVLNLLSEGLLYKEIGDKIFISID
TVKKHVGNIYRKLHVNNKVEAINKFNHFKN
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttccatagtcatagtagaagacgaaaaaaattataacaacgccttaaaaaag
gtcatcaattatcaggatgacatgaaggttgttgctcagttttttaatggcagtgaagcg
attgagaatcttatagaaatttctccggatgttgtcatgatggatatccagctgcaggat
atgctgggcatagaaattattgataaactgagaaaggaaatgccggagacccagtttatc
atgtgtaccagtttcgacgatgatgaaaaaatttttaattctttaaaggccggcgctaca
ggctacctcatcaaaggcgaaagtatggacaaaattcttgcatcgatccgtgatgtctac
aatggaggcgcacccatgagttcctctattgccaggaaggtccttaatcatttcgaaaga
aagaacagcgttgtaaaagatattgatgaattgacagaccgtgaaaaagaagttctgaac
cttttatcagaaggtcttctctacaaggaaatcggtgataaaatattcatcagtatcgac
actgttaaaaagcatgtcggaaatatctacagaaaacttcacgtcaataacaaagttgag
gcgattaataaatttaaccattttaaaaactaa
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