Chryseobacterium fluminis: ODZ84_17940
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Entry
ODZ84_17940 CDS
T09749
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
cflu
Chryseobacterium fluminis
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cflu03400
]
ODZ84_17940
DNA repair and recombination proteins [BR:
cflu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
ODZ84_17940
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
UZT97065
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All DBs
Position
3915991..3916437
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AA seq
148 aa
AA seq
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MEKQKSYLKDKRSPLALNENVSKIMSKNKAKNTRPELLLRKMLWNNGLKGYRIHPKTIPG
KPDICYLSKKIAIFVNGCFWHRCPHCSLTLPKNNTEFWKEKFEKNIKRDKEKNKILENDG
WQIVTVWECELKNKLETTFKNIELLISN
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaaaaaagttacttaaaagataaacgatcacctttagccttaaatgagaat
gtttcgaagataatgagtaaaaataaggcaaagaatacaagacccgaattattacttaga
aaaatgttatggaataatggtttaaaaggctatagaatacatccaaaaacaatccccgga
aaaccagatatttgttatttatccaagaagattgcaatttttgtaaatggatgcttttgg
catagatgtccacactgtagcttaacactacctaagaataatactgaattctggaaagag
aagtttgaaaagaatatcaaaagagataaggagaaaaataaaattctagaaaatgatggt
tggcaaatcgtcaccgtttgggaatgtgaattaaaaaataagttggaaacaacatttaaa
aatattgaattactaatctctaattag
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