Chryseobacterium fluminis: ODZ84_18275
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Entry
ODZ84_18275 CDS
T09749
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cflu
Chryseobacterium fluminis
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cflu02000
]
ODZ84_18275
Transporters [BR:
cflu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ODZ84_18275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
LPD26
Motif
Other DBs
NCBI-ProteinID:
UZT97127
LinkDB
All DBs
Position
complement(3996146..3997969)
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AA seq
607 aa
AA seq
DB search
MKKNKFLAIVFSIAGLISLSSCDQYLDVESLSNTAEAQQFDSASDTFSALVGVYNATMGD
NTYGQRMNLILTQSGDDLRTSGDYNANDRRGISCFGAITTNTELLRPFLDTYAGIERANL
VIKNIPLSPVYKTGSDADKKLMDRYLGEALTLRAQFYSDLIKNWGDVPFQDVPSADLPDL
YLPKTDRDIIYDKILDDLLRAESLVPWRSEGGTTAQRISKGAVKGLRARIALARAGYSLR
RAPQQMLQGSNPQKYYQIAYDECKDIINSGQHQLNPSYEGLFRSLHTNSQDATNEVIYAI
GAFGGNSRTDSKIGYYNGLRHDDTDWKSSGGISAIPTYFYEFSKYDLRRDINIAIFRVNT
TKQEELQTSINWNDGKFRKSWSNITGTSQNLGIDWPLLRYSDILLMFAEADNELHGSPSQ
EAIDAVMAVRRRAYTGNLGQVGTIPTGKTAFFNYIVKERQLEFGGEGLRKYDLIRWNLLE
TKINETRAKLTQFMNGTGEYANVPEYIFYKKVAYDKTKTAQQNISDIDFYTATGVAKSDI
FYTPNQSVATPSGYTKVNWRLAMTQPYISGDPIKSYAYYFQPNRKELLPLALDVVNSNYN
LTQDYGY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaataaatttttagctatagtcttttccattgcaggattaatatctttaagt
tcatgcgaccagtatctggatgtggaaagcttatccaacaccgcagaagcacaacaattc
gactctgcttccgacactttctctgcattggttggcgtttataacgcaacgatgggtgat
aatacctatggccagagaatgaatcttatccttacccaatccggagatgatctaagaact
tccggagactataatgccaatgacagaagaggaatcagctgttttggggctattactacc
aatacagaacttttaagaccttttttagatacctacgcaggtattgagcgagccaacctt
gttattaaaaatattccgctttcaccggtttataaaacaggttccgatgcagataaaaaa
cttatggacaggtatctgggtgaagctttaacgcttagagctcagttctattctgatctt
atcaagaactggggcgatgtaccttttcaggatgttccttcagcagatcttccagactta
taccttccgaaaacagacagagacatcatctatgataaaattctcgatgatttgttaagg
gctgaaagtctggttccatggagatcagaaggaggcaccactgctcagagaatttcgaaa
ggagccgttaaaggactgagagcacgaatcgcgcttgcaagagctggttactcattaaga
agagcaccacagcaaatgctgcagggatccaatcctcaaaaatattatcagatcgcttat
gatgaatgtaaagatatcatcaattccggacagcatcagttaaatccaagctacgaaggt
ttattcagatctttacataccaattctcaggatgcaacgaacgaggttatctatgctatc
ggagcattcggaggaaactccagaacagacagtaaaatcggttactacaatggtctcaga
catgatgacaccgactggaaatcttcaggaggtatcagtgccatcccgacttatttttat
gaattcagcaaatacgatctgagaagagatatcaatattgccatcttcagagtcaacacg
acaaaacaggaggaacttcagacttccatcaactggaatgacgggaaattcagaaaatca
tggtccaatattaccggtacttcccagaacctgggtatcgactggcctctattaagatat
tcggatatcctgttaatgttcgcggaagcagataacgaattgcacggctctccttcccag
gaagcgatcgacgcagtaatggcggtgagacgaagagcgtacacgggtaatctaggtcag
gtaggaaccattcctacaggcaaaaccgccttcttcaattatattgtaaaggaaagacaa
ttggaattcggaggggaaggactgagaaaatatgatttgatccgttggaatctgttagaa
accaaaattaatgaaacaagagctaagcttacccagtttatgaatggtacaggcgagtac
gcgaatgttccggaatatattttctataagaaagtagcctacgacaaaaccaaaacggct
caacagaacatttcggatatcgatttctatactgcaacaggagttgcaaaatcagatatt
ttctacacgccgaaccaaagtgtggcaacaccttccggctatacaaaagtaaactggaga
cttgccatgacgcagccatacatcagtggtgaccccattaagagttatgcctattatttc
cagcccaacagaaaagaattgcttccattagcgttggatgtggtaaactcaaactataat
cttactcaggattacggctattag
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