Chryseobacterium fluminis: ODZ84_19340
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Entry
ODZ84_19340 CDS
T09749
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cflu
Chryseobacterium fluminis
Pathway
cflu03420
Nucleotide excision repair
cflu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ODZ84_19340
03430 Mismatch repair
ODZ84_19340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cflu03400
]
ODZ84_19340
Enzymes [BR:
cflu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ODZ84_19340
DNA repair and recombination proteins [BR:
cflu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ODZ84_19340
MMR (mismatch excision repair)
Other MMR factors
ODZ84_19340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
Motif
Other DBs
NCBI-ProteinID:
UZT97316
LinkDB
All DBs
Position
4221321..4223654
Genome browser
AA seq
777 aa
AA seq
DB search
MEDYLKGLNESQFDAVTTLQGPLMVLAGAGSGKTRVLTMRIAHLITNGVDPFNILALTFT
NKAAKEMKERIARVVGQSNARSLWMGTFHSVFARILRGEAHLLGFPSNFTIYDQQDALNV
IKKVIKDMNIDADLYKPKKVQSRISTYKNNLITVRAYYNNPELMEADEKANMKFIGKIYE
KYVDACFRNGAMDFDDLLLKTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKA
LASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAITVSLEQNYRSTQNIVNAANV
VIAKNLQQFKKNVFSENEEGEKIKVYRSLSDADEANFVAGNIWETRNREQRKYSDFAILY
RTNSQTRAFEDALRRKNIPYRVYGGLSFYQRKEVKDLIAYLRLLINENDSEALMRIINYP
VRGIGETTQNKIIVFADAHNISVSKVLDSLPMYAPQLGLNNGVLNKLNDFWSMIKAFKVL
LKTETAYDVAMEVAKRSGLIKFLKDDQTPEGISRVENIQELMNSMQGFIEEQMQIEDGDP
SLPNFLENIALSADTQNKNDDEEMVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSATR
EDLEEERRLFYVALTRAEKQAFFSYAVSRFQWGKITDAEPSRFLSEIDDQYIEFVNPAIE
KRFINNSGVKSNIFDEHPSEMKSFKRVEKKTIEKAEGSKPIAEPRKLKPVATAKIINPSG
ASSQDIEVGDKVRHDRFGIGEVTFLDGTDPQNIKAKVVFMHEGEKNLILKYAKLTKI
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggaggattatctgaaaggacttaatgaatcacaatttgacgccgttaccacattacag
ggaccattaatggtacttgccggggctggttcgggaaaaacacgtgtgttgacaatgcgt
attgctcatttaattacgaatggagtagaccccttcaatattctcgcgctaacctttacc
aataaagcagcaaaagaaatgaaagaacgtattgcaagagtggtgggccaaagcaatgca
agaagtctctggatgggaacatttcactcggtgtttgcaagaattctgagaggagaagca
cacctccttggtttcccctccaactttacgatctatgatcagcaggatgcgctgaatgtg
atcaaaaaagtaatcaaagacatgaacatcgatgccgatttgtacaagcctaaaaaagtt
cagtccaggatctctacctataagaacaatctgatcacagtgagagcttattacaataat
ccggaactgatggaagctgatgaaaaagcgaatatgaaattcatagggaaaatctacgaa
aaatatgtcgatgcctgtttcagaaacggagccatggattttgatgatttgttattaaag
accaatgagctgctgacccgtttccccgaagtgctggcaaaataccaggacaggttcaga
tatatccttgtggatgagtaccaggataccaaccattcccagtacctgattgtaaaggca
ctggcttcaaagtttgaaaatatctgtgtggtgggtgatgatgctcagtctatctattca
ttccgtggagctaatatttacaatatattaaattttaagaaagattatcctgacgctatt
acggtctcactggaacagaattaccgttctacgcagaatatcgtgaacgcggcaaatgtg
gtgatcgccaaaaacttacagcagtttaagaaaaatgtattcagtgaaaatgaagaagga
gaaaaaataaaagtctaccggtcactttctgatgctgatgaggcaaatttcgtagcagga
aatatctgggaaacccggaacagggaacagaggaaatacagtgatttcgcgatcttatac
cggaccaactctcagacgcgtgcttttgaagatgctctgagacgcaaaaatattccgtac
agggtatatggaggtctgtctttctatcaacggaaagaggtgaaggatttaattgcttat
ctgcgtcttctgatcaatgaaaatgactccgaggcattaatgagaattattaattatccg
gtaagaggtataggggaaaccacgcagaataaaatcattgtttttgcagatgcccataat
atttctgtctcgaaagttttagacagtcttccgatgtatgctcctcagctaggactcaat
aacggggttttaaataaactgaatgatttctggtcaatgatcaaagcatttaaggtcctg
cttaaaacagaaacggcctatgatgttgcgatggaagtggcaaaacgcagcggtttaatc
aagtttttaaaagacgatcagacaccggaaggaatttcgcgtgtggaaaatattcaggaa
ttaatgaactcgatgcagggattcatagaagagcagatgcagattgaagacggagatccg
agtctgccgaattttcttgagaatattgccctttctgcagatacgcagaataagaatgat
gatgaggaaatggtttcgctcatgaccattcacctttcaaaaggcctagaattcccggta
gttcacctggttggtctggaggaaaatctcttcccgagttttatgagttcggctaccaga
gaagatctggaagaagaaagaagacttttttatgtggctttaacaagagctgaaaagcag
gcctttttctcatatgcggtttcccgtttccaatggggcaaaattacggatgcggagcct
tccagattcttaagcgaaattgatgaccagtacattgaatttgtgaatccggccattgaa
aaacgctttatcaacaattccggagtgaaatccaatatttttgatgaacacccttccgaa
atgaaaagctttaaaagagtcgaaaaaaagacgattgagaaagcagagggctcgaagcct
attgcggaaccccgtaagctgaaacctgttgccaccgcaaaaattattaacccgagcggt
gcttcgtcacaggatattgaagtaggtgataaggtaagacacgaccgtttcgggatcgga
gaagtaacattcctggacggaacggatccccaaaatattaaggcaaaagtagttttcatg
catgaaggcgaaaagaacttaattttaaaatacgctaagcttacaaaaatataa
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