KEGG   Chryseobacterium fluminis: ODZ84_19665
Entry
ODZ84_19665       CDS       T09749                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cflu  Chryseobacterium fluminis
Pathway
cflu03030  DNA replication
cflu03410  Base excision repair
cflu03420  Nucleotide excision repair
cflu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cflu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ODZ84_19665 (polA)
   03410 Base excision repair
    ODZ84_19665 (polA)
   03420 Nucleotide excision repair
    ODZ84_19665 (polA)
   03440 Homologous recombination
    ODZ84_19665 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cflu03032]
    ODZ84_19665 (polA)
   03400 DNA repair and recombination proteins [BR:cflu03400]
    ODZ84_19665 (polA)
Enzymes [BR:cflu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ODZ84_19665 (polA)
DNA replication proteins [BR:cflu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ODZ84_19665 (polA)
DNA repair and recombination proteins [BR:cflu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     ODZ84_19665 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ODZ84_19665 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 DUF2202 HHH_2 ACS_CODH_B_C
Other DBs
NCBI-ProteinID: UZT97379
LinkDB
Position
4290213..4293053
AA seq 946 aa
MDATQDKRLFLIDAYAMIFRGYYALIRNPRLTSKGVDTSAIFGFTNSLIELIRRERPTHL
AVVFDVGQASVRTDDFAEYKANRNETPEAIKVAIPYIQRILEAMHIPHLGVEGYEADDVI
GTIACKAEKEGYTTFMVTPDKDFAQLVTDKIKIYKPGLKGGDIEILGVEEVKAKYEIEDP
KQVIDYLAMMGDAVDNIPGLEGVGEKTAMKFLKEFGSIENLLANTDQLKGKLKEKVEASA
ERGILSKKLATIICDAPIEFHQEQYDLETPDFEKVKEVFDEIEFRRLYENLYRAFAPAAT
STTVVAEVEVTVTETSPQQKVAQAVGQLDLFATYEELDQATSTKSTIDTYDHLYQFVDNP
KAQKVLVNNLLKQKVVCFDTETTSLNELEAELVGMSFSYKKGLAYYVPLPEDQGEVLQIL
EIFRPFFEKEDLLKVAHNLKFDYKILQRYNITVKGAMFDTMIAHYLLNPDGRHGMDYLSE
IYLNYKPVSIETIIGKKGKNQGTFRDADLRTQTDYAAEDADITFQLYELFAPQLKKEKLE
DLFFTIEMPLMEVLAKMELEGISLDEKWLAQESIDLDNDLRKLEAKIFEISGEEFNMNSP
RQLGDILFDKMQLDPKAKKTKTGQYATSEDVLQKLASKHEIIQHILEYRTYQKLKSTYVD
ALPSQIEKTDNRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVSGEGKKII
SADYSQIELRLIAEISGEDNMIKAFQDGEDIHASTAAKLFKIPLEEVSKTQRSQAKTVNF
GIIYGQGAFALAEQTGLSRAEAKQMIEAYFETYPKLKEYMSDQVRKAREIGYVETILGRK
RHLKDINSNNFVVRGHAERNAVNAPVQGSAADVVKMAMIKIQKELEKEKLKTKMLLQVHD
ELIFEAPVDELEVAQNIIKMEMENAIETQVPLLVEVGVGNNWLEAH
NT seq 2841 nt   +upstreamnt  +downstreamnt
atggacgcgactcaagataaaagattatttctcatcgatgcttatgcgatgattttcaga
ggatattacgcactgatcagaaatccgagacttaccagcaaaggagtggatacctccgct
atttttggttttacaaattctctgatcgaactgatccgacgagaaagacctacccattta
gccgttgtattcgatgtaggacaggccagtgtaagaaccgatgattttgcagagtataaa
gccaacagaaacgaaacccctgaagcaataaaggtagcgattccatatattcagaggatt
ctggaagccatgcacatcccccatctgggagtggaaggttacgaagcagatgatgtgatc
ggaaccattgcctgtaaagctgaaaaagaaggctatacgacttttatggtaactcccgat
aaggattttgcccaattggttaccgataaaattaaaatatataaacccggtctaaaaggt
ggagacatcgaaattctgggagtagaagaggtaaaggcaaaatatgaaatcgaagatccg
aaacaggtgatcgattatctggccatgatgggcgatgccgtagacaatatccccggactg
gaaggggtcggagaaaaaacggccatgaaattcctgaaagaattcggaagcatcgaaaat
cttctggccaataccgatcagctgaagggcaagcttaaagaaaaagtggaagcctcggca
gaacgtggaattttatctaaaaaattagccacaattatttgcgacgctcccatcgaattc
caccaggaacagtacgatcttgaaaccccggattttgaaaaagtaaaagaggtttttgac
gaaatagaattcagaagattatacgaaaacctttaccgtgcctttgctccggctgcaact
tcaacaacggtggttgctgaggtagaagtgacggttacagaaacgtcgcctcagcaaaaa
gtggcgcaggcggtaggtcaactggatctttttgcgacttatgaagagctggatcaggct
acctcaaccaagtcaaccattgatacctacgatcatctctaccagttcgtagataatccg
aaagcgcagaaagttctggtcaataacctgttaaagcagaaagtagtctgcttcgataca
gagacaacttccctgaatgagctggaagcagaactggtcggcatgagcttctcttataaa
aaaggattggcttactatgttcccttacccgaagatcagggtgaggttctgcagatcctg
gagattttcagaccgttctttgagaaagaagacctgctgaaagtagctcacaatctgaaa
tttgactacaaaattcttcagagatataatattaccgtaaagggagcgatgtttgatacc
atgattgctcattaccttttaaacccggacggcaggcacgggatggattatctttcggag
atttatttaaactataaaccggtttctattgagaccattattggtaaaaaaggaaaaaat
cagggtactttcagagatgcagatctcaggacccagaccgactacgcggcggaagatgca
gacatcacttttcaactgtatgagctgtttgccccccagctgaaaaaggaaaagcttgaa
gacttattttttactatagaaatgccgttgatggaagttctggctaaaatggagctggaa
ggcatctctcttgatgaaaaatggctggctcaggaaagtatagatctggataatgattta
agaaaactggaagctaaaatatttgaaatttcaggagaagaattcaacatgaactcgcca
agacagctgggagatattctgttcgataaaatgcagctggatccgaaggctaaaaaaaca
aaaacgggccaatatgccacttctgaagatgtccttcagaaattagcctcaaaacatgag
atcattcagcatattctggaatacagaacctatcagaagctaaaatcaacgtatgttgat
gcattaccttcacagattgaaaaaacggataaccgggtacataccaatttttcacagact
acggcggcaacaggtcgtctggccagtgtaaacccaaatttacagaacatcccgataaga
acactcagaggtcagcagatccgtggcgcttttgtttcaggagaagggaaaaagattatt
tctgccgattattcacagatcgaacttcgtttgattgctgaaatttccggtgaggataat
atgattaaggctttccaggatggagaagatattcatgcttccaccgcggcaaaattattt
aaaatcccgttggaagaagtgtcgaaaacccaaaggagccaggcaaaaacagtaaatttc
ggaattatttacggacagggagcttttgcccttgcagaacagaccggactttcgagagcg
gaggccaaacagatgatcgaagcctactttgaaacctatcccaaactgaaggaatatatg
tcggatcaggtaagaaaggcccgggaaatagggtatgtggagactattctgggaaggaag
cgtcatttaaaagatatcaattccaataattttgtggtgagaggtcatgccgaacggaat
gcagtaaacgccccggttcagggaagcgctgctgatgtggtaaaaatggcgatgattaaa
attcagaaagaacttgaaaaagaaaagctgaagacaaaaatgttgctgcaggttcatgat
gaattaattttcgaagcgccggttgatgagcttgaagtagctcagaatatcatcaaaatg
gaaatggaaaatgccatcgaaacgcaggttccgctattggtggaagtcggagtagggaac
aactggctggaagcgcattaa

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