Chryseobacterium fluminis: ODZ84_20525
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Entry
ODZ84_20525 CDS
T09749
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cflu
Chryseobacterium fluminis
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cflu03400
]
ODZ84_20525
DNA repair and recombination proteins [BR:
cflu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ODZ84_20525
Archaeal homologous recombinant proteins
ODZ84_20525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
nSTAND_NTPase5
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UZT97535
LinkDB
All DBs
Position
complement(4477347..4481081)
Genome browser
AA seq
1244 aa
AA seq
DB search
MKILAIRIKNLASLEGVTEINFTDEPLCSIGIFAITGATGAGKSTILDALCLALYGKTPR
YLQARETGVEIQDVLGSTLSQGDVRGILRDGTADGFAEVDFRGVDGQNYRATWRVRRARN
RADGSIQSDSVTLKNLSTAVDMPGRKAETFNEIARLVGLNFEQFTRSVLLAQGDFTAFMK
ANRDEKSSLLEKLTGTHIYSEISRKIFEKYKAEELHLRDLHVRKEGIVTLSDEEQHALSA
DQELLESQIKSLEAEIEKYTAGIGWYEQLVNFQQSNDEAQNVLQVAAETKTSALPRSLKL
HAVEQAQQTRSWADALQQAQAQQTDQSALLVSLKETLASLQAQQETLEKQLIEADHQLSA
EHKALADAQPLLEKARKLDTLLSEKKEQVSQLKEEAQKVNEVNWQHQAILKNKEEAFVAL
LGEIDTISQWQTEQASRKPVAENKNLILSKLEDAQKLLEALQNAAASLAQLQNKIQTTEA
QKTNIERQWKQQLQAFENQQKSCNAQSEALLPIPIETLNRNKTKTDAQVEELIKAQAQWQ
LYYYAQTECESLKQKQVQDQTDHQHKQTLLQELYQQLPVIKAERDTADQILQQARLASAE
NVETLREALIEHEPCPVCGSTHHPYVVENPQLEKVLAQLEKAHQEKEQIYLASHSKHQAL
EQECQRLQTTIQRQKEDLQVKQSALKIQRQAWEQSDASKNSLSITDAEKASWIDTQLQAF
KAKQADLITQLQTYADQKQALETAKNMMDQLKENTDGLANQIKDIQNNLSLFQEQQNQMK
REQEVASTHLKGVEALLSPYFSASGWMENWKATPATFTDGITTFTEQWKAHTEKLDQCTR
EKAALEATLKVMEHQAKALASEAERKTETHLSQQEFYLDLSQQRQDLFVGQPADEKELQL
KQAISKAQEVFDHLKAMQQQLAIDRTKALTRQEELMAALNTLKSTIQKTSQHLLDWLEEY
NQKNDQPLSLEALHNLLTLGNNWIDTERKALQAIDEELTKANSILAERQQALARHQQNGA
SQIPLEELITLNVTVKSEVEEKKHKKGENSFRLQQDEANKNRIGDLLQSIATQAAITENW
AKLNEIIGSADGKKFRQIAQEYTLDVLLGYANIHLQALTNRYRIERIPASLGLQVVDQDM
GDEVRTVYSLSGGESFLVSLALALGLASLSSRRMKVESLFIDEGFGSLDPTTLNIAMDAL
ERLHNQGRKVGVISHVQEMTERIPVQIKVSKQQSGRSKVEVNHK
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccatacgcattaaaaatttagcttcattagaaggagtcaccgaaatc
aactttacggacgagcccttatgttctatagggatcttcgccatcaccggtgctaccgga
gccggaaaatcaaccatcctggatgctttatgtttggccttgtacggaaaaacgccccgt
tatctccaagccagggaaacaggcgttgaaattcaagatgtactgggaagcacactaagc
cagggcgatgtgcggggcattctgcgcgacggcactgctgatggatttgctgaagtcgat
ttcagaggagtcgatgggcaaaactaccgcgctacctggagggtgaggcgggccaggaac
cgtgccgatggaagcatacaatctgattcggtgacgctaaaaaacctcagcaccgcagtc
gatatgcccggcagaaaagcagaaaccttcaatgaaatcgcacgattggtcggtttgaat
tttgagcaatttacccggtcggtgttgctggcgcagggtgactttaccgcttttatgaaa
gccaaccgcgacgagaaatcttctttgcttgaaaagctgacgggaacccatatttattct
gaaatctcccggaagatctttgaaaaatacaaggccgaagaattacacctacgcgatctc
catgtccgtaaagaaggtattgtcaccctgagtgatgaagaacagcacgccctatctgca
gatcaggagctgctggaaagccagatcaaaagccttgaagcagagatcgaaaaatacact
gccgggatcggatggtacgaacaactcgtcaactttcaacaaagcaacgatgaagcacaa
aatgtcttacaagtagctgctgaaaccaaaacttccgctttaccgagaagccttaaatta
catgcagtcgaacaggcacagcaaacccgaagctgggcagatgccttacagcaagcacaa
gcacaacagaccgatcaatcagccctgctggtctctttaaaggaaaccctggcttcactg
caagcacaacaggaaacacttgaaaagcagctaatagaagccgaccatcagctttctgct
gaacataaagcccttgcggatgcgcaacccttactggaaaaagccagaaagctcgatacg
ctgctgtcggagaaaaaagagcaggtcagccagctgaaagaagaggctcagaaagtaaat
gaagttaactggcaacatcaggctatacttaaaaataaagaggaagcatttgttgcactg
ctgggagaaatagacaccatcagccaatggcagactgaacaggcttcccgaaagccggtt
gccgaaaataaaaatctcatcctctccaaactggaagatgcacaaaaactgctggaagcg
ctgcaaaatgctgcggcaagtttagcacagttacagaataaaatccaaaccaccgaagcc
caaaaaacaaatattgagcggcagtggaaacagcagttgcaggctttcgaaaatcaacaa
aaaagctgcaatgcccaatccgaagcattactgcccattccgatcgaaaccctgaaccgc
aataaaactaaaactgacgctcaggtagaagagctgatcaaggcacaggcacaatggcaa
ctgtactattatgcacagaccgaatgcgaaagtttaaagcagaagcaggtacaggatcaa
accgatcatcaacacaaacagacgcttctacaagagctttaccaacaactgccggtcatc
aaggcggaaagagatacagctgatcaaatactgcaacaggcccggctggcatcggcagaa
aatgtagaaacgttgagggaagcactgatcgagcatgaaccctgcccggtatgtggcagc
acacaccatccttatgtggtggaaaacccccaactcgaaaaggttttggctcaactcgaa
aaagcccatcaggaaaaagaacaaatctatctggccagccatagcaaacatcaggcctta
gagcaggaatgccagcgcctgcaaaccaccattcaacgacagaaggaagatcttcaggtg
aaacaatccgcccttaagatccaaagacaagcctgggaacaatcggatgcgtcgaaaaac
agtctttctataactgatgcggaaaaagcatcatggattgacacccaattgcaggctttt
aaagcaaaacaggctgatctgatcactcaattgcaaacctatgcagaccaaaaacaagcg
ttggaaacggctaaaaatatgatggatcaactaaaggaaaataccgacggcctggcgaat
caaatcaaagatattcaaaacaacctgtccttatttcaggaacagcaaaaccagatgaaa
cgcgaacaggaagtagcttcgacccatctgaaaggagttgaagcacttctatcgccatat
ttctccgcatccggctggatggaaaactggaaggctacccctgctacatttacagatggc
attacaacttttaccgaacaatggaaagcccataccgaaaaactggatcaatgtacccga
gaaaaagcagcactggaagcgactctgaaagtaatggaacaccaggcaaaagcactggca
tcagaagccgaaaggaaaacggaaactcatctctctcaacaggaattttacctggatctg
agccaacaacgtcaagacctttttgtagggcagcctgctgatgaaaaggaacttcaactg
aaacaggccatcagcaaagcccaggaagtatttgaccatctaaaagccatgcaacaacag
ctggccatcgatcgtaccaaagcccttacccggcaggaggaactcatggccgcgttaaat
acattgaaaagcacgatacagaaaacttcacagcatctgctggactggctggaggagtat
aaccaaaagaatgatcagccgctcagcctagaagcactccataatttgctgacattgggc
aacaactggatagacaccgaacgcaaagcattgcaggcgattgatgaagagttgaccaaa
gccaacagcattcttgccgaacgacaacaggctttagcgcgtcatcagcaaaatggtgca
tcgcaaatcccactcgaagaactcatcaccctcaacgttacggttaaatcagaagtggaa
gaaaagaagcataaaaaaggagaaaatagcttccgcctgcaacaggatgaagctaacaaa
aaccggatcggcgacctactgcaaagtatcgcaacacaggcagccatcaccgaaaattgg
gcaaagctcaacgagatcattggttcagccgatgggaagaaattccgccagattgcccaa
gaatataccctggatgtgctattgggttatgccaacatccatttgcaggccttgaccaac
cgctaccggatcgaacgcattccggcatcattgggtctccaggtggtggatcaggacatg
ggcgatgaagtgcgtacggtttactcgctttcgggtggagaatctttcctggtgtcgctg
gctctggccttaggtttggcttcgctgtcatccaggcgcatgaaagtagaatccttattt
attgatgaaggtttcggctcgctagatcctaccacactcaacatcgccatggatgccctc
gaacgcctgcacaaccagggccgaaaagtaggtgtgatctcgcacgtccaggaaatgacc
gaacggattccggtgcagatcaaagtgagtaagcagcagagcggcaggagtaaggtggag
gttaatcataaataa
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integrated database retrieval system
