Chryseobacterium fluminis: ODZ84_20605
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Entry
ODZ84_20605 CDS
T09749
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cflu
Chryseobacterium fluminis
Pathway
cflu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ODZ84_20605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cflu03019
]
ODZ84_20605
03016 Transfer RNA biogenesis [BR:
cflu03016
]
ODZ84_20605
Enzymes [BR:
cflu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ODZ84_20605
Messenger RNA biogenesis [BR:
cflu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ODZ84_20605
Transfer RNA biogenesis [BR:
cflu03016
]
Prokaryotic type
tRNA degradation factors
ODZ84_20605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
KH-I_KHDC4-BBP
PCB_OB
Cytochrom_C_2
Motif
Other DBs
NCBI-ProteinID:
UZT97549
LinkDB
All DBs
Position
4493794..4496055
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AA seq
753 aa
AA seq
DB search
MSIPQAFTETITLADGREVTLETGKLAKQADGSVVVKLGGTMLLATVVANKEANPGVDFL
PLTVDYREKFYAGGRIPGNFFRREARPSDQEILTMRLVDRVLRPLFPEDFHAEVQVMISL
ISYDGQTIPDDLAGLAASAAIAITDIPFNGPMSEVRVVRFDGELAINPSYEALKSSELDI
MVGATKDSIVMVEGEMKEISEQEMLEAIKFGHAEIKKQIEAQERLAEKVGKSFPKREYSH
ENHDEAIREKVWKETYDKVYEVARTPSGKEERGEKFKAVREEFLAQYVDNAEELERVTPF
VKVYYHDVEKEAMRQMILEDNIRLDGRDPQTIRPIWSEIDYLPGAHGSAVFTRGETQSLT
AVTLGSVKDANMVDSVISQHDEKFFLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALQ
AVIPEENPYTIRIVSDILESNGSSSMATVCAGTLALMDAGVQITKPVSGIAMGLITDAKS
GKFTVLSDILGDEDHLGDMDFKVTGTEDGITACQMDIKIQGLSMDIMEKALMQARDGRLH
ILNKITETISEPRADVKPHAPKMVVMEISKDFIGAVIGPGGKIIQQLQKDTDTVIAIEEQ
GEIGRIEIAGTDREKINAAVARINEITFVPVVGEVYSGKVVKVMDFGAFVAIAKGTEGLL
HISEIEWARLDKVPYAEGDEVEVKFMGYDDRKKMKLSRKVLLPRPPRPEGKPRPEGQGRP
EGQGRPERPARPEGQRRPEGEKPADDQNPSTEA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagtatacctcaagcgtttacagaaacgattactcttgcagatggcagagaagttact
ttagaaacggggaaattggcgaaacaggccgatggatctgtggtcgtaaaattaggcgga
accatgcttttagctactgtggtagccaataaagaagccaatccaggtgttgatttttta
ccattaacggtagattacagagaaaaattttatgcaggaggaagaattccaggaaatttt
ttccgaagagaagcaaggccttctgatcaggagatcttaacgatgcgtttggtagaccgc
gttctgcgcccgctttttcctgaagatttccacgcggaagttcaggtcatgatttcattg
atttcttatgacggacagacaattcctgatgatttggcaggtttggcggcttctgctgcg
attgccattacggatattcctttcaacgggccaatgtctgaggtaagagtcgtaagattc
gacggagaattagccattaacccgagctatgaagctttaaaaagttcagaactggatatt
atggtgggagctaccaaagactccatcgtaatggtggaaggggaaatgaaggaaatttct
gagcaggaaatgttagaagccattaaattcggtcatgctgaaattaaaaagcagatcgaa
gctcaggagagactggcagaaaaagtaggaaaatctttccctaaaagagaatattctcac
gaaaaccacgatgaggcgattcgtgagaaagtatggaaagaaacttatgataaagtatat
gaagtggcaagaacgccttccggaaaagaagaaagaggtgaaaaattcaaagcggtacgc
gaagaattccttgctcagtatgtagataatgcagaagaactggaaagagtaacacctttc
gtaaaagtatattatcacgacgtagagaaagaagcgatgcgtcagatgatccttgaagac
aatatccgtctggatggccgtgatcctcagacgatccgtccgatctggtcagaaattgat
taccttccgggagcacacggttctgccgtatttacaagaggagaaacccagtctttaaca
gccgtaactttaggttctgtaaaagacgccaatatggtagacagcgtgatttctcaacat
gacgaaaaattcttccttcactataacttccctccattctccaccggagaagcgagacct
ctcagaggaacttcaagaagagaagtaggacacggaaacttagctcagagagctttacag
gctgtcattcctgaagaaaacccgtacaccatcagaattgtttctgatattctggaatct
aacggttcgtcttctatggcaacagtgtgtgcaggaacgttagcattaatggatgcggga
gtacagattacaaaacctgtttccggtattgcgatgggattgatcacggatgcaaaatcc
ggtaaattcaccgtactttctgatatcttaggagatgaagatcacctgggagatatggac
tttaaagtaacaggaaccgaagacgggatcactgcgtgtcagatggacatcaaaattcag
ggactttctatggatatcatggaaaaagcactgatgcaggcaagagacggaagattacat
atccttaataaaatcacggaaacaatttctgaaccgcgagctgatgtgaaacctcatgct
ccgaaaatggtggtaatggagatctccaaagacttcattggtgcggtgatcggacctggc
ggaaaaatcattcagcagctacagaaagataccgacacggttattgctattgaagagcaa
ggtgaaatcggacgtattgagattgcaggtaccgacagagagaaaatcaatgctgcggta
gccagaatcaacgaaatcacttttgttcctgttgtaggcgaggtttatagcggtaaagta
gtaaaagtaatggatttcggagctttcgtagcgattgcgaaaggtactgaaggtcttctt
cacatttctgaaatcgagtgggcgcgtttggataaagttccgtatgcagaaggggatgaa
gtagaagtgaaattcatgggttatgatgaccgtaaaaaaatgaagctttcaagaaaagtt
cttttaccaagacctccaagaccggaaggaaaaccaagaccggaaggtcagggcaggcca
gaaggacaggggagaccagagagaccggcaagaccggaaggacagagaagacctgaaggg
gaaaaacctgcggatgatcaaaatccttcaactgaagcgtaa
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