Chryseobacterium fluminis: ODZ84_21180
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Entry
ODZ84_21180 CDS
T09749
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cflu
Chryseobacterium fluminis
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cflu03016
]
ODZ84_21180 (truB)
Enzymes [BR:
cflu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ODZ84_21180 (truB)
Transfer RNA biogenesis [BR:
cflu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ODZ84_21180 (truB)
Prokaryotic type
ODZ84_21180 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
YyzF
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UZT97658
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All DBs
Position
4639634..4640332
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AA seq
232 aa
AA seq
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MTAEDLQSGYIFLLDKPLDWTSFQAVNKMKYKLKREFNLPKKFKIGHAGTLDPRATGLLI
VCCGKFTKKISEIQDAPKEYWTEIKIGVQTESYDTEKPEILQQDISEITEEHVNKALEKF
VGEIEQKPPVFSAIKIDGQRAYNLARAGEDVEMKSRKTTIFYIRDIEINFPLVSFTVGCS
KGTYIRSLAHDIGQELGVGAYLTQLRRTKIGDYTIENATDRFLENEFRFENL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaagatcttcaatcaggatatatatttttattggataagccattggactgg
acttcttttcaggcagtcaataagatgaaatataagctcaaacgagagtttaatcttcct
aaaaaatttaaaatcggtcatgccggaactttagatccgcgggcaacgggacttcttatt
gtctgttgtggaaaattcaccaaaaaaatttccgaaatccaggatgcacctaaagaatac
tggaccgaaataaaaatcggcgttcagacagaatcctatgacaccgaaaaacctgaaatt
ctgcaacaggacatttcagaaattactgaggaacatgttaacaaagccttagaaaaattt
gtgggagaaatagagcagaagcctccggtattttcagcgataaaaatagatggacaaaga
gcctataatctggcaagggcaggagaggatgtagaaatgaagtccaggaagaccacgatt
ttttatattagggatattgagatcaattttcctctggtaagctttaccgtaggatgctcg
aaaggaacttacatccggagtcttgcccatgatatcgggcaggaattgggtgtgggtgct
tatcttacccagttaagaagaacaaaaataggagattataccatagaaaatgcaacagat
cggtttttggaaaacgaattcagatttgaaaatttatga
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