Chryseobacterium fluminis: ODZ84_22385
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Entry
ODZ84_22385 CDS
T09749
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cflu
Chryseobacterium fluminis
Pathway
cflu03030
DNA replication
cflu03430
Mismatch repair
cflu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ODZ84_22385 (holA)
03430 Mismatch repair
ODZ84_22385 (holA)
03440 Homologous recombination
ODZ84_22385 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cflu03032
]
ODZ84_22385 (holA)
03400 DNA repair and recombination proteins [BR:
cflu03400
]
ODZ84_22385 (holA)
Enzymes [BR:
cflu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ODZ84_22385 (holA)
DNA replication proteins [BR:
cflu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ODZ84_22385 (holA)
DNA repair and recombination proteins [BR:
cflu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ODZ84_22385 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
UZT97884
LinkDB
All DBs
Position
4907726..4908763
Genome browser
AA seq
345 aa
AA seq
DB search
MKELDLILKNIKNKEVLPIYFFHGEEPYFIDLAVKALEHDFLNEDEKAFNQTVVYGKDTT
YHEILSLARQFPMMGDKQVIIVKEAQDLRLAESENTALETYIQNPVASTVLVFAHKHKKL
DSRKKVTKSLDKANALFLSEPVREAHLPKWIADECISLKIKTAPNISHLLAEYLGNDLSR
IANELNKLKIILKEGEILDGSMVENHIGISKEYNVFELQKALGTKNSNAAFKIAHFMGKN
PKNNPFVMLLASLYNYFSNVIIYNTMMGQPPQVIASQMGVNPYFIKDYAESARLYPLKHA
TRVISILREFDMKGKGLGAVNMGEAELIKELVYKIINVDKIKMKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagatttaatcctcaaaaatattaaaaataaagaagttttaccgatttat
tttttccatggagaagaaccttactttatcgatcttgctgtaaaagctcttgaacacgat
tttttgaatgaagatgaaaaagcttttaaccagaccgtcgtgtatggaaaagataccacc
taccacgaaattctttctttagcgaggcagttcccgatgatgggagacaaacaggtgatc
atcgtgaaggaagcacaggatttaagattggcagaaagtgaaaatactgctttagaaacc
tatattcagaatcctgtagcctctacggttttggtatttgcccataaacataaaaaactg
gacagccggaaaaaggttaccaaatcactggataaggccaacgctctatttttaagtgaa
cccgtaagagaagcgcatcttccgaaatggattgcagacgaatgtatttctttaaaaata
aaaacagctcccaatatttctcatttgctggccgaatatcttggaaacgacctttccagg
atcgctaacgaacttaataaactgaaaattatccttaaagaaggagaaattctggacggc
agcatggtggaaaaccatatcggaatcagtaaagaatataacgtattcgaactgcagaag
gcattaggaacaaaaaacagcaatgctgctttcaaaattgctcattttatggggaaaaat
cctaaaaacaatccgtttgtgatgttgttggccagtctttacaactatttctcaaacgtt
atcatctacaataccatgatgggccagccaccccaggtaatcgcctcccagatgggagtc
aatccctattttataaaagattatgcagaatctgccagactttatcctttgaagcatgct
acaagggtcatttcgatattaagggaattcgatatgaaagggaaaggccttggcgctgtc
aatatgggtgaagctgaactgattaaggaactggtgtataaaatcattaacgtagataaa
attaagatgaaagtttag
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