Clostridium formicaceticum: BJL90_00365
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Entry
BJL90_00365 CDS
T05005
Name
(GenBank) hypothetical protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
cfm
Clostridium formicaceticum
Pathway
cfm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BJL90_00365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfm03400
]
BJL90_00365
DNA repair and recombination proteins [BR:
cfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BJL90_00365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Motif
Other DBs
NCBI-ProteinID:
AOY74539
UniProt:
A0AAC9RKG8
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Position
complement(86324..88273)
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AA seq
649 aa
AA seq
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MNKKAMIYLEFDLIKDILKEYTLSHLGEKRIEALEPITDKTVIENWIKETTEGVQLLSGG
SSAPLHALTGIERVMEKLGKVSALSIEDIITIYDLLIEGNRMKQYMKGRMETAPCLSSYA
LSISELPQLTTEIEKSIQHGKVSDKATSTLAKIRKNIKIIDEKIKTKLENILKSSEIKKY
LQENLISTRDGRYVIPVQAQYKSKVKGTVLDSSATGSTVFIEPESIRKHCGELSLLKIQE
EKEIYKILSDLTLLIETYQREIAVNIEVMVQYDFVFAKAKYSRAIEGVPVKLNNKSYIKI
VEGKHPLIGKTAVALDFVIGEAYKALVITGPNTGGKTVVLKTVGLLTLMVQSGLHVPVKE
NSEFAIFDDVLVDIGDGQSIEQSLSTFSSHIENIKEILTQATNNTLVIVDELGAGTDPGE
GMGLATSILENLMEKKATILATTHYNGIKEFAAKKEGFENGAMGFDILSLKPLYKLKIGK
SGESNAFLIALRLGLDRSIIERAHEITYGEKKLYSMKLVEEMAEGQKTNVFVSKEKKRVE
TLNKKENKQEKSEKKRSFHIGDCVLISFLGKTGIVCQEENSVGEVGVLYQGKKIKVNRKR
LSLYVEAEALYPEDYDMNILFESKENRKKQHKMSKGYVPGLVIEYDKKE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaagctatgatttatttggaatttgatttaattaaggatatattaaaggaa
tataccctttctcacttaggagaaaaaaggatagaagcactggaacctattacagataaa
acggtgattgaaaactggataaaggaaacaacggaaggagtacaactattatcaggaggc
tccagtgcacctctccatgccctcacaggcatagaaagagtgatggagaagctgggcaag
gtctcggctctttcaatagaagatattattaccatatatgatttattgatagaaggaaat
cgaatgaaacaatatatgaagggaagaatggagaccgccccctgcttaagtagctatgca
ctttctatttcggaattaccacaactcactaccgaaattgaaaaatctatacaacatggt
aaggtaagtgataaggctacctcaacacttgctaaaataagaaaaaatattaaaataata
gatgagaagataaaaacaaagttagagaatattttaaagtcttcagaaatcaaaaaatat
ttacaggaaaatttaatcagtacaagagatggaaggtatgtcatacctgtccaagcccaa
tataaaagcaaggtgaagggaactgtattggattcttctgccacgggttcaactgttttt
attgaaccagaaagtatcagaaaacattgtggagaactttctttgcttaaaatacaggag
gagaaagagatttacaaaatattatctgatttaacccttttgatagaaacctatcaaaga
gaaattgccgttaatatcgaagtgatggtacaatacgattttgtttttgccaaagctaag
tatagcagagctattgaaggagtacctgtaaaactcaataataaaagttacattaagatt
gttgaaggcaagcatcctttaatcggtaaaactgctgtagctttagactttgttattggg
gaggcttataaagctttggtgattacaggacccaacaccggcgggaaaactgttgtatta
aaaacagtaggacttctaaccttgatggtgcaatcaggcttacatgttcctgtaaaggaa
aatagcgagtttgcaatatttgatgatgtcttagtggatataggagatggtcaaagtata
gagcaatcccttagcactttttcctcccatatagaaaacatcaaggaaatattaacacaa
gctacgaataatacattggttatagtagacgaactaggagcaggaacagatcctggagaa
ggtatgggtctagctacttctattttagagaatcttatggaaaaaaaagctacaatctta
gccaccacccattataatgggataaaggagtttgctgcaaaaaaagaaggttttgaaaat
ggtgccatgggttttgatatcttgtctttaaagcctctctataaattgaagataggaaaa
tccggagagagtaatgcctttttgattgctttaagactgggcttagatagatccatcatt
gagagggcccacgaaataacctatggagaaaagaagctttattctatgaaactggtagag
gaaatggcagaagggcaaaaaacaaatgtttttgttagtaaggaaaagaagagggtagaa
accttgaataaaaaagaaaacaagcaggaaaagtccgaaaaaaagagaagttttcatata
ggagattgtgttttaataagctttttgggaaaaacaggcatcgtatgccaagaagaaaat
tctgttggggaagtaggcgttttatatcaaggaaaaaagatcaaggtcaataggaaaagg
ctttctttgtatgtagaggcggaggcactatatcctgaggattatgacatgaatattcta
tttgaaagcaaagaaaaccgaaaaaaacagcacaaaatgagtaaaggttatgtgccggga
ttggtgattgagtatgataaaaaagaataa
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