Clostridium formicaceticum: BJL90_02135
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Entry
BJL90_02135 CDS
T05005
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cfm
Clostridium formicaceticum
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfm03019
]
BJL90_02135
Messenger RNA biogenesis [BR:
cfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BJL90_02135
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Fer4_ETF_QO
Motif
Other DBs
NCBI-ProteinID:
AOY74860
UniProt:
A0AAC9RP53
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All DBs
Position
complement(477235..478200)
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AA seq
321 aa
AA seq
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MHIKQLKDLSSKLLNETIEAVVLLSEIKVKTTKTDKKYADIIIQDASKAMEAKYWDYEEH
EEKFKSFQPYEIVQIQGQVGEYAGQLQLTIRNIERVSSDKVSIKDLIPTSPWEFESMKKG
LEYFHNRIETPHLKELIDKMIFSTENYEKFCTYPAARKVHHNFYHGLLHHTLEVLKLVNT
VASTKKLSQHQTDRLFVMTMLHDWGKMMEYKALPALGLTEEGMMIGHIFLGAHYTLNAIN
EIDDFPEEDKLVILNGILGHHGSLEFGSPVLPKTVEAQILHQADKMSGDVESILSFIKED
TEEEETFTRRLWNMGTEYYKK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgcatattaaacaattaaaagatctatcttcaaaattattgaatgaaactatagaggca
gtagtattattatcagagattaaagtgaagactacaaagacagacaaaaagtatgcggat
atcatcattcaggatgcatctaaggcaatggaagccaagtattgggattatgaagagcac
gaagaaaagtttaaaagttttcagccctacgagattgttcagatacaaggacaggtgggg
gagtacgcaggacaattgcaattaaccattagaaatattgaaagggtcagcagtgataaa
gtatctatcaaggaccttattcctacgagtccctgggaatttgaaagtatgaaaaaaggc
ttagaatatttccataatagaatagaaacacctcatttaaaagagcttatagacaagatg
attttttcaacagaaaactatgaaaaattttgtacctatccagctgctagaaaagtacat
cataacttttatcatggtctattacatcatacccttgaggtattaaagctcgtgaataca
gtagctagcacaaaaaagctgtcacaacatcaaacggatagattgtttgttatgacaatg
ttgcatgactggggaaaaatgatggaatacaaagcattaccagcgttaggcttgacggag
gaaggcatgatgattggacatatttttctaggggctcactatacattgaatgctatcaat
gagatagacgattttcctgaagaagataagctggtaattctaaatggtatactaggacat
catggaagtttagagtttggttcaccagttttgcctaagacagtagaagcacaaatctta
catcaagcagataaaatgtcaggggatgttgaaagtattttatcttttataaaagaggat
acagaagaggaggaaacctttacaagaaggctgtggaatatggggacagaatactataaa
aaatag
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