Clostridium formicaceticum: BJL90_02420
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Entry
BJL90_02420 CDS
T05005
Name
(GenBank) RNA polymerase sigma-I factor
KO
K03093
RNA polymerase sigma-I factor
Organism
cfm
Clostridium formicaceticum
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfm03021
]
BJL90_02420
Transcription machinery [BR:
cfm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BJL90_02420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
ARM_TT21_4th
DUF6017
Motif
Other DBs
NCBI-ProteinID:
AOY74911
UniProt:
A0AAC9RR28
LinkDB
All DBs
Position
complement(543340..544080)
Genome browser
AA seq
246 aa
AA seq
DB search
MTKFLDLFKKKKTIEERVRSIQQGDIDSKEQLIQEYIPFITKALSNQVHKYIELENDDIF
SIGLMAFNEAIDKYDEKKGSFLAFASLVMKSRVIDQWRKEHKASQRIRTIQLFSENREEV
QEDVAVIEGFESQVELKIDMATLVERMKDFGVSLEDLIKSAPKHRDTKNTAIKIGRYVYE
HQLLKEKFLRTQNLPITQIVKNLEVSKKVIQRNRKFIIAVIFILDSNLDTLKHYLSIDEG
SEMDAT
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaatttctcgatctgtttaaaaagaaaaagacgattgaggaacgggtaaggagt
attcagcagggagatatagattcgaaggaacaattaattcaagaatacattcccttcatt
accaaagccttaagtaatcaagtacataaatatatagagctagaaaatgatgacattttt
agtattggattaatggcttttaatgaagctatagataaatatgatgaaaaaaaagggagt
tttttagcttttgcatctcttgttatgaaaagcagagtaatcgatcaatggagaaaagag
cacaaggcttctcaaagaataaggacaatacagctttttagtgaaaatagggaagaagtt
caagaggatgtagctgtaatagaaggatttgaaagtcaagttgagttgaaaatagatatg
gcgacattagtagagagaatgaaagacttcggcgtttctttagaagacttgattaaaagt
gctcctaaacacagagatacgaaaaacactgccatcaagataggaagatatgtttacgag
catcaactattgaaagaaaaatttcttaggacgcaaaatttacctataacacaaatagta
aaaaacttagaagtatcaaagaaagtaatccaaagaaatagaaaatttattattgcagtg
atatttatattagatagcaatttggatacccttaaacattatctttctatagacgaaggg
agtgaaatggatgcaacataa
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