Clostridium formicaceticum: BJL90_03990
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Entry
BJL90_03990 CDS
T05005
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cfm
Clostridium formicaceticum
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfm03400
]
BJL90_03990
DNA repair and recombination proteins [BR:
cfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BJL90_03990
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_LapB
AAA_25
ATPase
DnaB_C
AAA
ChlI
nSTAND3
AAA_22
NPHP3_N
CbiA
AAA_30
TackOD1
NTPase_1
IstB_IS21
KdpD
AAA_11
Thymidylate_kin
DUF7129
B12-binding
AAA_16
UBA_NBR1_C
Motif
Other DBs
NCBI-ProteinID:
AOY75137
UniProt:
A0AAC9WHX7
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Position
complement(826249..827643)
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AA seq
464 aa
AA seq
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MKEKIIYQCSSCGYQSLKWVGRCPGCDSWNTVEETIVQMTKKSTTSKNNIKKKAPTLKLT
DVQGSKSDRIVTQINEFNRVMGGGIVRDSMTIITSPPGGGKSTLTLAVANDVAAKGYKVL
YASGEESDSQIKNRADRILNKINENIWIIADTSMDHVLETIEEIDPDLVIVDSIQTFSLS
QHLPARAGNPTQTMECSNELLKVAKNSNKPRAVIMIGQMNKNDEIAGLRSLEHLVDTVLV
IEGEDEAELRGILATKNRFGSTGEMGFFSMTERGLLSIDNPSEFFMTKREEGEVVSGSAL
TVLREGSRPIIVEIESLVSNAFTPYPSRIGEAFRREQLNTLISILEQRGGINLFNKNVVI
KTTGGIKLKEQAVNLAVIMSIASSVYNKGIANDVVFIADVGLTGELKKVPALEARIKELD
RMGFKKVYIAKNAFSKTVKFNNIDVVQLKTLQEVIQQVFSGGKS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaaataatatatcaatgttcaagctgtggataccagtcactaaagtgggtg
ggaaggtgccctggttgtgatagttggaatactgttgaagaaaccattgtccaaatgact
aaaaagtctacaacaagtaaaaataatataaaaaagaaagcacctacattaaaactaaca
gatgttcaagggagcaaaagtgatcgcatcgtcacgcagataaatgaatttaatcgggtg
atggggggcggcattgttagagattccatgacaattatcacctcgcctcctggagggggt
aaatctactttaaccttagcagtagcaaatgatgtagctgcaaaaggttataaagttttg
tatgcttctggagaagaaagtgatagtcaaattaaaaatagggcggataggatattgaat
aaaattaatgagaatatttggattattgccgatacaagtatggatcatgttttagaaact
atcgaagaaatagatcctgatttggtgattgtggatagcatacagacatttagtttgagc
cagcatctacctgcaagggcgggaaacccaacacaaacgatggagtgttctaatgaattg
ttaaaggtcgcaaaaaatagtaataaaccaagggctgttattatgataggtcaaatgaac
aaaaatgatgaaatagctggattaaggtcactggaacatttggttgatacagtattggta
atagagggagaagatgaagcggagttaagagggatcttagctacaaaaaatagatttggc
agcactggagaaatgggttttttttcaatgacggaaagaggacttttgtctatagataat
ccctcagagtttttcatgacgaaaagagaagaaggggaagttgtttcaggaagtgcccta
actgttctacgagagggttctaggcccattattgtagagatagaaagcttagtatctaac
gccttcactccatatccttctagaattggagaggcttttaggagagaacaattaaataca
ctaatatctattcttgaacaaaggggaggaattaatcttttcaataaaaatgtagttatt
aaaaccacagggggaataaagcttaaagaacaagcagtaaatttggctgttattatgagt
attgcttcctctgtatataataaaggtatagcaaatgatgtagtttttattgcagatgtg
ggacttacgggggaactcaaaaaagtccctgctcttgaagcaaggataaaagagcttgat
agaatgggttttaagaaagtatatattgcaaaaaatgctttttctaaaactgttaaattt
aataatattgacgttgttcaactaaaaacccttcaagaagtaattcagcaggttttttca
ggagggaagtcttag
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