Clostridium formicaceticum: BJL90_05585
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Entry
BJL90_05585 CDS
T05005
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cfm
Clostridium formicaceticum
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfm03032
]
BJL90_05585
03400 DNA repair and recombination proteins [BR:
cfm03400
]
BJL90_05585
Enzymes [BR:
cfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BJL90_05585
DNA replication proteins [BR:
cfm03032
]
Prokaryotic type
DNA Topoisomerases
BJL90_05585
DNA repair and recombination proteins [BR:
cfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BJL90_05585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
TOPRIM_C
HATPase_c_3
TcdA1_RBD_2
Motif
Other DBs
NCBI-ProteinID:
AOY75421
UniProt:
A0AAC9RFH3
LinkDB
All DBs
Position
1198904..1200829
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AA seq
641 aa
AA seq
DB search
MENEIQDKIQEYNAEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHIVYEVVDNSIDEALAG
YCDAIEVIINEDNSIKVTDNGRGIPVDIHPQTGKSTLETVLTVLHAGGKFGGGGYKVSGG
LHGVGISVVNALSEFLEIEVRRNGKTYFQRYERGNPLDDVKEVGDAMDTGTTVLFKPDAE
IFDEMIYRYDTLEHRLRELAFLNKGIKITLMDKREGQQKENIFHYSGGIQEFVKHLNKNR
EPLHDKIIYFDKSKDGSVVEVAMQYTDAYTENIFSFANNINTQEGGTHLSGFKSALTRIV
NDYARKNGFLKEKDVNLLGEDIREGLTAVISVKLSDPQFEGQTKTKLGNSEMKGLAESIT
GENLEAFLEENPTEARLIVEKGLKAQRAREAAKKARELTRRKGVLENTALPGKLADCSEK
DPALSEIYLVEGDSAGGSAKQGRDRATQAILPLRGKILNVEKARLDKILNYNEIRAMITA
FGTGIGDEFDIAKLRYHKIVIMTDADVDGAHIRTLLLTFFFRYMKPLVELGHIFAAQPPL
YKIKKGKAEHYAYSDKELNKILDDLGRETKADIQRYKGLGEMNPEQLWETTMNPEHRTLL
QVTIEDAAAADEIFTTLMGDKVEPRREFIEQNAKYVTNLDI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaatacaagataaaatacaagaatataatgcagaacaaattcaagtatta
gaaggactagaccctgtaagaaaacgacctggaatgtacatagggagtactggtttaagg
ggtttacatcatattgtttatgaagtagtagataatagtatagatgaggccttggcaggt
tactgcgatgcaattgaagtcatcatcaatgaggataactctataaaagtaacggataat
ggtagaggaattccagtagatatccatccacagacagggaagtccaccttagaaacagta
ctaacagtattacatgctggtggtaaatttggcggagggggctataaagtttcgggaggt
ttacacggggtaggtatttctgttgtaaatgctttatcagagtttttagagattgaagtt
agaagaaatgggaaaacttattttcagagatatgaaagaggaaatcctttagatgatgtc
aaagaagtaggagatgcaatggatacgggaacaactgtattatttaaacctgatgcagaa
atctttgacgaaatgatttatcgttatgatacattggaacaccgcttaagagaattggct
tttttaaataaaggaattaaaataaccttaatggataaaagagaaggccagcaaaaagaa
aatatttttcattatagcggtggtattcaagagttcgtgaaacacttaaataaaaacaga
gagccgctacatgataaaatcatctatttcgataaatcaaaggatggtagtgtggtagaa
gtagctatgcaatataccgatgcttatactgaaaatatctttagttttgctaataatatc
aatacgcaagagggtggaacacatttaagtggctttaaatctgccctaacaagaatcgtc
aacgattatgcaagaaagaatggttttttaaaggaaaaagacgttaatctactgggagaa
gatatccgagaaggtctaacagctgttatttctgtaaagttatcagatccgcaatttgaa
ggacaaacgaagacaaaactaggaaatagcgaaatgaaaggtttagcagagtctattacc
ggagaaaatctagaagcctttttagaggaaaatcctacagaagctaggcttattgtagaa
aagggcttaaaagctcaaagggctagagaggctgcgaagaaggcaagggaattaacaaga
agaaaaggtgttttggaaaatacagctttacctggaaaattagcagattgctcagaaaaa
gatcccgccttaagtgaaatctatctcgtagagggagattccgcgggagggagtgctaag
caaggacgagatcgtgctacacaagcaattttacctttaaggggtaaaattttaaatgtt
gaaaaggctcgattggataaaatactaaattataatgaaattcgagctatgattacagcc
tttggtacaggcataggtgatgaatttgatatagcaaagctaagataccataaaattgtt
attatgacggacgccgatgtagacggtgctcatattagaacattgttactaactttcttc
tttagatatatgaaacctttagtagagcttggacatatttttgctgctcaaccaccttta
tataaaataaaaaaaggtaaggcagaacattatgcttattcagataaagaactgaataag
atattagatgatttaggaagagaaacgaaagcagatattcaaagatataaaggtcttgga
gaaatgaatccagaacagctatgggaaaccactatgaacccagaacatagaacattactt
caagtaacaatagaagacgctgcagcagcagatgaaatatttactactctgatgggagat
aaagtagagcctagaagagaatttattgaacaaaatgccaaatatgttacaaatttagat
atataa
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