Clostridium formicaceticum: BJL90_07250
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Entry
BJL90_07250 CDS
T05005
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
cfm
Clostridium formicaceticum
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
BJL90_07250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_N
Tex_YqgF
HHH_3
S1
HHH_9
HHH_7
YqgF
DUF6502
T2SSK
Nas2_N
HHH_6
YpjP
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
AOY75708
UniProt:
A0A1D9FJZ7
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Position
1559383..1561551
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AA seq
722 aa
AA seq
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MKLINQLAKEFNIKISQVEETIKLIDEGNTIPFIARYRKEMTGGLSDEVLRDLHERLVYL
RNLESRKEEVIRLIDEQGKLTEELKKEILMAEVLQKIEDLYRPFRPKRRTRATVAKEKGL
EPLAEIFLIQEISHGTIEDLAKPFINEALEVMNVEDAISGAKDIIAEIVSDDAKYREKIR
GMNLRKAVIHSEAVDQEEKTVYEMYYGFSEGVSKIANHRILALNRGEKEKKLKVKLLSPE
EEVMTYLMEEVVASKKGITIPVLKEAIEDAYKRLIAPSMEREIRNILTERAEEEAIKVFG
KNTKPLLLIPPVKDVRILAIDPSYRTGCKIAVLDETGKLLDYTTIYPNAPQNKVEEAKKV
LKELIDKYKIDIIPIGNGTASRETEFLIAELLKEIDHKVYYTIVSEAGASVYSASKLATE
EYPDIDVSIRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDLNQGKLGETLKNVVEDCV
NSVGVDLNTATPSLLQYVAGISSAVAKNVVQYREENGKFTNRLQLKKVKRLGDKVFQQCA
GFLRISHGDNPLDNTAVHPESYKITMRLVEKLGYSKEDIQVGKLRSIEEKIAEYGTKLKD
LAEELEVGLPTLQDIIQEIKKPGRDPREEMPKPIFRSDVLKMEDLKVDMVMTGTVRNVVD
FGAFVDIGVKQDGLVHVSELSNKFVKNPMEVISVGDEVEVKIIGLDVERGKIALSIKQVQ
NL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaataaaccagttggcaaaagagtttaatattaaaatcagtcaagttgaagag
acgataaagttgatagatgaaggtaacacgataccctttattgcgagatatagaaaggaa
atgactggcgggttaagtgatgaggttttaagagacttacacgaacggcttgtatattta
agaaacctagaatcaagaaaagaagaagtaataaggttgattgatgaacagggaaagctg
acagaagaattaaagaaggaaatactaatggcggaggtacttcaaaaaattgaagacttg
tatagaccctttagaccgaaaagaaggacaagggctacagttgcaaaggaaaaaggctta
gaacctctagcagagatatttttgatacaggaaatttcacatggaacaatagaagattta
gcaaagccattcattaatgaggcattagaagtaatgaatgttgaagatgctataagtggt
gctaaggatattatcgctgaaattgtatcagatgatgcaaaatatagagaaaaaataaga
gggatgaacttaagaaaagccgtgattcatagtgaagcggtggatcaagaagaaaaaaca
gtttatgagatgtattatggtttcagtgaaggggtaagtaaaatcgccaaccatagaatc
ttagctttgaacagaggagaaaaagaaaaaaagttaaaggtaaagctgctaagcccggaa
gaagaagtgatgacatacttaatggaagaggtggttgccagcaaaaaaggcattactatt
cctgttctaaaggaagctatagaagatgcatataagcgtctaatagctccctctatggaa
agagaaatcagaaacattctgacagaaagagctgaggaggaagcaataaaggtttttggc
aaaaacactaagccactgcttttaattcctcctgtgaaggatgtcaggattttagcgatt
gacccaagttataggacagggtgcaaaattgctgtgttggatgagacaggaaagttatta
gactatactaccatttatcccaatgcacctcaaaataaagtagaagaggccaagaaagta
ctaaaggagctcatagataaatataaaattgatatcatcccaataggaaacggtactgcc
tctagagaaacggagtttcttatagcagagctgttaaaagaaattgatcataaggtatat
tacacgattgtaagtgaagcaggtgcatctgtatattcagcttctaagctggcaacggag
gagtacccagacatagatgtatccattcgtggtgctatttctataggccgcagactacaa
gacccattagcggaactagtaaagatagatcctaaaagcatcggcgtaggccagtatcaa
cacgatctaaatcaaggcaaattgggagaaacgttaaagaatgtggttgaagactgtgta
aatagtgtaggggtagatttaaatacggctacaccgtctttattgcaatatgtagcggga
atttcctctgctgttgctaaaaatgttgtacagtatagagaagaaaacggaaagtttact
aatagacttcaactaaaaaaagtcaagagactgggagataaagtatttcagcagtgtgca
ggttttttaagaatctctcatggggataatccgctagataatacagctgtccatcctgag
tcttataaaattacaatgagattggtagaaaagctaggatacagcaaagaagatatacag
gtgggcaagcttaggagtattgaagaaaagatagcagaatacggaactaagttaaaggat
ttggcagaggaattagaggtaggactacctactttgcaggacattattcaagagataaaa
aagcctggcagagatccaagagaagaaatgccgaagcctatctttaggagtgatgttcta
aagatggaggatttaaaggtagatatggttatgacaggtaccgtaagaaatgttgttgat
tttggcgcttttgtagacataggggtaaagcaggacggccttgtgcacgtttctgagcta
agcaacaagttcgtgaaaaatccaatggaggtaatttctgtaggagatgaggtagaggta
aaaattattggtttagatgtagaacgaggaaagattgctcttagcataaagcaagtacaa
aatctataa
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