Clostridium formicaceticum: BJL90_07845
Help
Entry
BJL90_07845 CDS
T05005
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfm
Clostridium formicaceticum
Pathway
cfm03420
Nucleotide excision repair
cfm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJL90_07845
03430 Mismatch repair
BJL90_07845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfm03400
]
BJL90_07845
Enzymes [BR:
cfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJL90_07845
DNA repair and recombination proteins [BR:
cfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJL90_07845
MMR (mismatch excision repair)
Other MMR factors
BJL90_07845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DUF3553
ResIII
AAA_11
DEAD
AAA_22
Rota_NS6
AAA_16
Spore_III_AB
Motif
Other DBs
NCBI-ProteinID:
AOY75820
UniProt:
A0AAC9RKW6
LinkDB
All DBs
Position
1692015..1694195
Genome browser
AA seq
726 aa
AA seq
DB search
MNLSHLNNMQRRAVEHTEGPLLVLAGAGSGKTRVLTHRIAYLVEEKGVSPYNLLAITFTN
KAAREMKERLESLMEEGCKDLWVSTFHSACMRMLRMDIEKIGYQKNFVIYDTADQLTVMK
DCIKKLSLDEKYFNPRAVLGAIGKAKDQLIGPEEFTRIHGSDFRDAKIGELYKMYQKTLK
NNNALDFDDLIMKTVELFNQNPAVLHYYHNKFKYILVDEFQDTNMAQYTLVSMLAKQHKN
LCVVGDDDQSIYGWRGADIQNILGFEKDFPGAAVVKLEENYRSTKTILEAANRVVVNNEG
RKDKKLWTGNDEGEIIQYYKANNEYDEASYIANCIETLRKEKYPYSNFAILYRTNAQSRV
LEEELMKQGVPYKIFSGTRFYDRKEIKDILAYLTTVENPVDDISVKRIINVPKRGIGLKT
IEKIEAYGEKLGIRFFEALLDIEEMGDISGRVQKQIKKFTDMIIDLRERKEEMKVTEIVE
ELYKKTGYIDALKEEDRVEADTRIENLYEFLSLTVDFDENAEVKTLEEFLARTSLESSLD
SDNEEEDAVVLMTLHSAKGLEFPVVFMPGMEEGIFPSYMSMQEKNEEEERRLCYVGITRA
MKKLYMSHAMMRTLYGRTSYNSCSRFLEEIPQELIAKEKAYKRKEEVKKMQTSPLFTGGG
LSSFHDKPKLNTTVIKKKVNAGDKVKHPTFGIGTVVSAGGDILTIAFPSAGVKKISSAFV
QLDVVE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcacatttgaataatatgcagcgtagggctgtagaacatacagaaggacct
ctcctggtattggcaggggcgggaagtggaaagacaagggtactgacccatcgtattgcc
tatctagtagaggagaagggggtatctccttacaacctattggcgattacctttaccaat
aaagccgctagagaaatgaaggaaagacttgagagtttaatggaggaaggctgcaaggat
ttgtgggtgagtaccttccattctgcttgtatgcggatgcttagaatggatattgaaaaa
ataggttatcaaaaaaactttgttatttatgatactgctgatcagttaacggtgatgaag
gactgtataaaaaaattaagcttagatgaaaaatacttcaatcctcgagcagttttggga
gccattggaaaagctaaggatcaactgatagggccagaagagtttacaagaatacatggc
agtgattttagagatgctaaaataggtgaactttataaaatgtaccaaaagactttgaag
aataataatgccttagattttgatgatttaattatgaagacagtggagctttttaatcaa
aatcctgctgtgctccactattatcacaacaaatttaaatatatactagtagacgagttt
caggataccaatatggcccagtatactttagtgagtatgctggcaaaacagcataaaaat
ctttgtgtggtaggggatgatgaccaatccatctatggatggaggggagctgatattcaa
aatatactaggttttgaaaaggattttcctggagcggcagtggtaaaattggaagaaaat
taccgctccactaaaaccatattagaagctgctaatagggttgtggtaaacaacgaagga
agaaaggataaaaagctttggacaggtaatgatgagggagaaattattcagtactataag
gccaataatgaatacgatgaagcctcctacatcgctaattgtatagagactttaagaaaa
gaaaaatatccctattcaaattttgctattctttatagaaccaatgcccagtcccgtgta
ttagaggaagaactgatgaaacaaggcgttccttataagattttttcaggtacacgcttc
tatgatcgtaaagagatcaaagatatccttgcttatttgacgacagtggaaaatccagta
gatgatatcagtgtaaaacgaatcattaatgtacctaagagaggaatcggtcttaaaacg
atagaaaagatcgaagcctatggagaaaaattggggataaggttttttgaagcattattg
gatatagaagaaatgggagatatcagcggaagggtacaaaaacaaattaaaaaatttacg
gatatgatcatagatttaagagagagaaaagaagaaatgaaggtaactgaaattgttgaa
gaactttacaagaaaacaggatatattgatgccttgaaggaagaagatcgtgtggaggcg
gatactagaatagaaaatctttatgaatttctatccctgacggtggatttcgatgagaat
gcagaagtgaaaaccttagaggaatttttagctagaacctctctagaaagttctttagat
agtgacaatgaggaagaagatgcagtcgtactgatgactttacacagtgctaaaggctta
gagtttcctgtagtgtttatgccgggaatggaggaagggatctttccttcctatatgtcg
atgcaagaaaaaaatgaagaagaagagcgaagactttgttatgtaggaattactcgagcg
atgaaaaagctctatatgagccatgccatgatgcgaaccctttatggtagaaccagttat
aatagctgttctaggtttttagaggaaattcctcaagaacttattgctaaggaaaaggcc
tataagcgtaaggaagaagtgaaaaaaatgcagacttctcccctctttactggtggagga
ttatccagttttcatgataagcccaagctaaatactacggtcataaagaagaaagtaaat
gcgggagataaggtaaagcaccctacctttggtatagggactgtagtgtctgccggtggt
gatatattaactattgcttttccaagtgcaggggtgaaaaagatttcttcagcatttgtt
cagttggatgtagtagaataa
DBGET
integrated database retrieval system
