Clostridium formicaceticum: BJL90_08395
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Entry
BJL90_08395 CDS
T05005
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cfm
Clostridium formicaceticum
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfm03400
]
BJL90_08395
DNA repair and recombination proteins [BR:
cfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJL90_08395
Archaeal homologous recombinant proteins
BJL90_08395
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Epimerase_2
Csm2_III-A
Motif
Other DBs
NCBI-ProteinID:
AOY75911
UniProt:
A0A1D9FKI9
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Position
1837883..1839049
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AA seq
388 aa
AA seq
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MKILHTADWHIGKIVNNVHMTKEQEYVLNQFVDLVSREKPDVVIIAGDIYDRSVPPVEAV
ELLDNVFNKILLECKTPIIAIAGNHDSGDRVGFARKILRDHGLHIAGRLKKEIEKLTLED
AFGPVNFYVIPYADPAEVREIFNQEEIKTHDEATKVIIKEINKTINLRERNIAVFHGFVV
GGQAPEESTSERPLSIGGTEYITYEHFKNFHYTALGHLHGPQKSGEEHIRYAGSLLKYSF
SEVKHRKGVKLVELGEKGEVTITFKSLIPRRDMRIIKGELNKLLDIEVYKDTNTEDYLHV
ILTDEGELIDPINKLRSVYPNILSIEREVKTTKNRSSKTSAGAGYKSKSKLTLFQDFYVN
ITGRKFEEEKEKVMLEVIKEVEKMEKGE
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacttcacactgctgattggcatataggaaaaatcgtaaataatgtacatatg
acgaaggagcaagaatatgttttaaaccaattcgtggatctagtttctcgcgagaaacca
gatgtagtgatcattgcgggagatatttatgatagaagtgtcccccccgtggaagctgta
gaattgttggacaatgtatttaataaaatacttttagagtgcaaaacgcctatcatcgcg
atagcgggaaatcatgatagtggagatcgggtgggttttgcaagaaaaattcttagagat
catggattgcatattgcagggagattaaaaaaagagatcgaaaaattaactttggaggat
gcgtttgggccggtaaatttctatgttattccctatgcagatcctgctgaagtaagagag
atttttaatcaagaagaaatcaagacccacgatgaggctacaaaggtgattataaaagag
atcaataagacaataaacctaagagaaagaaacattgctgtttttcatggatttgttgtt
ggaggccaagcgccagaagaaagtacctcagaaagacctttatccattggagggactgag
tatattacttatgaacattttaaaaattttcattatactgctttagggcatttgcatggt
cctcaaaaatcaggagaagagcacatccgttacgctggctcattactgaaatattctttc
tcggaggtaaagcatagaaagggagtgaagctggttgaactgggggaaaaaggagaagtt
acgataacttttaagtccttaatacctcgcagggatatgaggattattaagggagaatta
aacaaattgttagatatagaagtatataaggataccaatacagaagattatctccatgta
atcttaactgatgaaggggaacttatagaccctattaataaacttagaagtgtatatccc
aacatactatctatagaaagagaagtaaagaccacgaaaaatagatcatcaaaaacttct
gctggggcagggtataaaagtaaaagtaaactgacgctttttcaagatttttatgtcaat
attactgggagaaaatttgaggaagaaaaagaaaaagtgatgttggaagtgataaaagaa
gtagaaaaaatggaaaagggtgagtga
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