Clostridium formicaceticum: BJL90_10100
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Entry
BJL90_10100 CDS
T05005
Name
(GenBank) diguanylate phosphodiesterase
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cfm
Clostridium formicaceticum
Pathway
cfm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BJL90_10100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfm02000
]
BJL90_10100
Transporters [BR:
cfm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BJL90_10100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AOY76222
UniProt:
A0AAC9RGP0
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Position
2232952..2234559
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AA seq
535 aa
AA seq
DB search
MRTRDKKIKLGIIFIWIVMFLVTACSSSNLSAGEENQEVSVEVEEEKSDEIALIRLEGGD
WGYPSPYLHYSRGPGGYKMQLVFDGLLERDEKGLIPWIAKEWEVSEDGLNYIFTIHEGIQ
WHDGEPLKLEDIQFSFEYLKKHPPVWNPVAIEGKPFVKDIEVLEDNKIKFTLAEENATIL
EKIGDVRIIPKHIWENVEDPEKFEDEKAVIGCGPYTLTGYSKEHGTYEFTAFEDYWGPKQ
RVEKIQFVPVSDGVLAFENNEIDLVGVGTDLLDRYQNDPEFKVSEAPGFWGYRLLFNMEK
NPIFKEKEIRQAIAYGIDQEEMVAKVARGAAIPGSAGYLPEHHIWYNPKVRKYPFDEEKA
KELLGDKKVSLQLLTANSNAEIRIAELMKISLNKIGIEVNIESVDSKARDHAVTTGDYEV
VLTGHGGWGGDADGLRERYASEVRVSGSPSANIIRGYENQQIKALAEEQLREMDTNKRKE
IIFALQEVIAEEIPMIPIYNTTGYSVYRPATYDGWMYMYDHHSLEHSKLSYLTRK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
ttgaggacaagagataaaaaaataaaattgggaattatttttatttggatagtaatgttt
ttggtgacagcctgtagttcatccaacttaagtgctggtgaagaaaatcaagaagtttca
gtggaagtagaggaagaaaaaagtgatgaaatagcgttgattcgtttagaaggtggagat
tggggttatccctctccttatctgcactactccagagggcctggaggttacaaaatgcaa
ttggtttttgatggtttgcttgagagggatgagaagggactgattccttggattgctaag
gaatgggaggtttcagaggatggtctgaactatatttttacaatccatgaagggattcaa
tggcatgatggtgagcccctcaaacttgaagatattcaattttcctttgaatatttaaaa
aaacatcctccagtttggaatccagttgcaatagagggaaaaccttttgtgaaggatatt
gaagttttagaggacaataaaatcaagtttaccttagcagaagaaaatgcaacgattctt
gaaaaaataggtgatgtgcggattattccaaagcatatttgggagaatgtagaggaccct
gagaagtttgaagacgaaaaggctgtgataggatgcggaccttatacattaacaggctat
agtaaagagcatggcacctatgagtttacagcctttgaagactattggggaccaaagcaa
agggtagaaaaaattcaatttgtgcctgtaagtgatggtgttttggcctttgaaaataac
gaaattgatttagttggtgtaggtactgacttgttggatcgttatcaaaatgatcctgaa
tttaaggtatcagaagctccaggcttttggggatatcgtttgcttttcaatatggagaaa
aatcctatctttaaagaaaaggaaatacgacaggccattgcttatggtattgatcaggag
gagatggtagcgaaggtagcaagaggggctgccattccaggaagtgctggttatttacca
gaacatcatatttggtacaatccaaaggtaagaaaatatccctttgatgaagaaaaggct
aaggaattactaggagataaaaaagtatcccttcaattgttaacagcaaacagcaatgca
gaaataagaattgcagaattgatgaaaattagcttaaataaaataggtatagaagtgaat
atagaaagtgtggattccaaagcaagagatcatgctgtaacaactggtgattatgaagta
gtattgactggtcatggaggatggggcggcgatgccgatggtttacgggaaagatatgcc
tcagaggtcagggtcagtggctccccctctgctaatattattcgcggttatgaaaatcaa
caaattaaagcattggcagaggaacagttaagagaaatggataccaacaagcgaaaagaa
atcatctttgctctacaggaggttattgcagaagagattcctatgattcctatttataat
actactggttatagtgtttatcggccagctacctatgatggatggatgtatatgtatgac
catcatagtcttgaacacagcaaattatcttatttaacaagaaagtag
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