Clostridium formicaceticum: BJL90_11410
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Entry
BJL90_11410 CDS
T05005
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cfm
Clostridium formicaceticum
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfm03000
]
BJL90_11410
Transcription factors [BR:
cfm03000
]
Prokaryotic type
Helix-turn-helix
Other families
BJL90_11410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
PAS
PAS_9
PAS_8
AAA
AAA_2
AAA_5
HTH_30
PAS_4
Mg_chelatase
ATPase
nSTAND3
AAA_3
HTH_50
HTH_29
AAA_7
NIBRIN_BRCT_II
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AOY76461
UniProt:
A0AAC9RJY9
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Position
2580947..2582842
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AA seq
631 aa
AA seq
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MLDKNTLKPIIERSHARCKKLGVDINQVASKTVISGFELQNKLSYNKDLILTAKPYMEQL
NEFVKGSSFFALLTDGEGCILNALGDDEILSEAFEMKMIPGAYMNEENIGTNAMAIIIKE
KVPIQMSGKEHYIKAYHKWTCSAAPIKDIYGNVIGILNLTGYMEDAHLHTLGMVIAASNA
IEEMLKVKQYSKTSCMTQRQMKLVFDSIPVGIITTDVNGKVLSANKKAVEMFGYIEYELK
RKSLKDLVENWEKIKKAIYSGKSYCEKDQLIYGLNNKILFDITAHPAYNSDENIMEITFI
FQEVKKPRKLANKLEEGRAIYTFDKIVTENQDFRNIIQYAKKISDSKSTILITGESGTGK
ELFAQSIHNYSRRMDEPFVALNCGAIPKELIEAELFGYEEGSFTGAKKGGSNGKFEIANG
GTIFLDEIGEMPLEMQTKLLRVIQEGMITRIGSSKSMYVDVRVIAATNKNLRREVEENRF
RKDLYYRLNVLPLNLPPLRKRIEDIVPLTRYFMKSLSKSLNKKEVEIPDEYIQHLINYNW
PGNVRELENVVELIINTENFPVMTSSQHNEMQVDQNWLSQTSSESLKLEEIEKDHLIKVL
NICKGNVSQAAKTLGIRRNTLYNKINKYNLN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttggataaaaatactttaaaacctattatcgagagatcccatgcgagatgtaaaaaa
ttaggtgttgatataaatcaggttgctagtaagacggtgattagcggttttgaattacaa
aataaactaagttataacaaagatttaatattaacggctaagccctacatggaacaattg
aatgaatttgttaaaggttcaagcttttttgcccttctaacagatggggaaggatgcata
ttaaatgccttaggagatgatgagattctttctgaggcatttgaaatgaaaatgattccg
ggggcttatatgaatgaagaaaatattggaaccaatgcaatggccattatcataaaagaa
aaagtgcctatacagatgtcaggtaaagaacattacattaaggcataccataagtggaca
tgctctgcagcacctataaaagatatttatgggaacgtaattggcattctcaatttaact
ggatatatggaagatgcacatttacatacactaggtatggtgattgcagcctccaatgct
attgaagaaatgttaaaagtgaaacagtatagcaagaccagttgtatgacccaaagacaa
atgaagttggtatttgattcaattccggtaggaattattaccacagatgtgaatggtaaa
gtcttatctgccaataaaaaagctgttgagatgtttggctatatagaatacgaactaaaa
cgaaaaagtttaaaagatcttgttgaaaattgggaaaagattaaaaaagcgatttattca
ggaaaaagttactgtgaaaaagaccaacttatctatggtttgaacaataaaattttattt
gatattacagctcatccagcctataattctgacgaaaatatcatggagattacttttatt
ttccaagaggtaaaaaaacctagaaagcttgctaataagttggaggaaggaagggcgatt
tatacctttgataaaattgtaactgaaaatcaagactttaggaatattattcaatatgca
aagaaaatttctgatagcaagtctaccatactgattacaggggaaagtggtacaggaaaa
gagttatttgcccaatctattcacaattatagtagaagaatggatgaaccttttgtggcg
ctaaattgtggtgctattccaaaagagctaattgaggcggagttatttggctatgaagaa
ggttcttttactggagcaaaaaaaggtgggagtaatggaaaatttgaaatagctaatggc
ggaactatatttttagatgaaattggtgaaatgcctcttgaaatgcagacaaagctttta
agagtgattcaagaggggatgattactcgtattggaagctctaaatcaatgtacgtagat
gttcgtgttattgcagctaccaataaaaatcttagacgagaggtggaggaaaatagattc
agaaaagatctttattatagattaaatgttttgccattgaatttgccccctttaagaaaa
cgtatagaggatattgttcctctaacaagatactttatgaaatccctatcgaaaagcctg
aataaaaaagaagtagaaattcctgatgaatatattcaacatctaattaactataattgg
ccaggaaatgttcgtgaacttgaaaatgtagtagaacttattattaatacagaaaatttt
cctgttatgacttcttctcaacataatgagatgcaggttgatcaaaattggctaagtcag
acaagcagcgaaagtttaaagttagaggagatagaaaaagaccacctaattaaggtactt
aacatttgcaaaggaaacgtctctcaggctgcaaaaaccttaggaattcgaagaaatacc
ctatataataagataaataaatataatttaaattaa
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