Clostridium formicaceticum: BJL90_15400
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Entry
BJL90_15400 CDS
T05005
Name
(GenBank) DNA topoisomerase
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cfm
Clostridium formicaceticum
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfm03032
]
BJL90_15400
03400 DNA repair and recombination proteins [BR:
cfm03400
]
BJL90_15400
Enzymes [BR:
cfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BJL90_15400
DNA replication proteins [BR:
cfm03032
]
Prokaryotic type
DNA Topoisomerases
BJL90_15400
DNA repair and recombination proteins [BR:
cfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BJL90_15400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
DUF5760
Motif
Other DBs
NCBI-ProteinID:
AOY77111
UniProt:
A0AAC9RMD7
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All DBs
Position
complement(3337430..3339409)
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AA seq
659 aa
AA seq
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MTTKKQHNYDNDSLSTLQEKDKVRLRPGVIFGSDGIEGCCHTLVEIVANARDEAQEGFGD
LIEVFRYKDKSIEVRDQGRGIPLEYNTKEEKYNWEIVFTILYGGGKYNNNTGSNYQYSIG
LNGLGTAATQFASEYMDVEVYRDGHRYQLHFEKGEVVGALIKEKYNYQHTGTTIKWKPDL
EVFNDIDIPLKFFQEVLKRQAIVNKGITFKLYDEATEETFVYYYENGIIDYVKEVNEEKG
FTEPQYFEFETKGRDREDKEEYKLKIEVAFVFNNERTMLEYYHNSSFLEYGGAPDKAVDS
GFSSQIHSFIKDKNKYTKNEKRVTFTDIKDSLILVTNTYSTITSYENQTKKAITNKFIQE
AITTFLKEKLEIYFIENQMDLEKIIDQILINKRSREKAELTRIDVRKKLSKGVDNFSNKV
KKFVDCRSKDIAKRELFIVEGDSALGSTKMGRDAEFQAIIPVRGKILNCLKSDYDKIFKN
DIIVDLLKVLGCGVEIKNKHSDLSFFDIEKLNWSKVIICTDADVDGFQIRTLILTMLYVL
TPTLIEKGYVYIAESPLYEITDSKGNPFFVYSEGEKNTLLKKLKSNYKIQRSKGLGENEP
EMMWQTTMNPETRRLIQVTPTEAQATKEAFELFLGDNLLGRKEFISKYGSKYIDQCDVI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaaaaaacaacataattatgataatgatagtctttcaaccttacaggaaaaa
gataaggttcgacttaggccaggggtaatctttggtagtgatggtatagaaggatgctgc
catacccttgtagaaattgtagcaaatgccagggatgaagcccaagaaggttttggggat
ctgatagaagtattccgctataaggataaatctatagaggtaagggatcagggaagagga
atccctttagagtataatacgaaagaggaaaagtataactgggagattgtatttaccatc
ctttatggcggtggaaaatataataataacactggaagcaactaccaatatagtattggg
ctaaatggccttggtactgcagccacccagtttgcctctgaatacatggatgtagaagtc
tatcgagatggccatagataccagctgcattttgaaaagggagaggttgttggtgcgtta
ataaaggaaaagtataattatcaacacacaggcacaaccatcaaatggaagcctgaccta
gaggtatttaatgatatcgacatccctctaaaattttttcaagaagttcttaaaagacag
gctatcgtaaacaaaggaattacgtttaaactctatgatgaagcaacagaggaaactttt
gtttattactatgaaaatggcattatcgattatgtaaaagaggttaatgaagaaaagggg
tttactgaacctcaatattttgaatttgaaacaaaaggaagagatagggaagataaagaa
gaatataaacttaaaatcgaagtagcctttgtctttaataatgagcgtaccatgcttgaa
tattatcataattcttcctttttagagtatggtggagcgccagataaggctgtagacagt
ggattttcttctcaaatccatagctttataaaagataagaataagtacactaagaatgaa
aaaagagtcacctttacggatattaaagatagtttaatcttagttaccaatacatattcc
acgatcacaagttatgaaaatcagacaaaaaaggccatcaccaataaatttattcaagaa
gctataacgacttttttaaaggaaaaactagaaatttattttatagaaaatcaaatggat
ttagagaaaatcattgatcagatattaattaataaacgaagtagagaaaaggcagagctg
accaggatagatgttagaaaaaaattaagtaaaggtgtggataatttctctaataaagtt
aaaaagtttgtggattgcagaagcaaagatatcgctaaaagagaattgtttatcgtagaa
ggagattctgcattaggttcaacaaaaatgggtagagacgcagaatttcaagcgattatt
cctgtgcgagggaaaatcttaaactgcttaaaatccgattatgacaagatatttaaaaat
gacattatcgttgacctcctcaaggtattaggctgcggtgtggagattaaaaacaaacac
agtgacttgagcttttttgatattgaaaaactcaattggagtaaagttatcatttgtaca
gatgccgatgtagacgggtttcaaattaggactttaattctcaccatgctatatgttctt
acccctaccttgatcgaaaagggttatgtctatatagcagaatcacccttgtatgaaatt
accgatagcaaaggaaatccattttttgtctattcagagggagaaaaaaataccctctta
aaaaagctaaaaagtaattataaaattcaaagatcaaaggggttaggagaaaatgaacct
gagatgatgtggcaaactaccatgaatccggaaacaagaagattgattcaggttaccccg
acagaagcacaggccaccaaagaagccttcgaattgttcctgggagataatctgctggga
agaaaagagtttatttcaaaatatggttctaagtatattgatcaatgtgatgtaatttaa
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