Clostridium formicaceticum: BJL90_15745
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Entry
BJL90_15745 CDS
T05005
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
cfm
Clostridium formicaceticum
Pathway
cfm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BJL90_15745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfm03400
]
BJL90_15745
DNA repair and recombination proteins [BR:
cfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BJL90_15745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_14
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AOY78411
UniProt:
A0ABN4TH31
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Position
complement(3407368..3409971)
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AA seq
867 aa
AA seq
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MMQQYTDIKNLYKDALLFFRLGDFYELFFDDAITASRELEIALTGRDCGLDERAPMCGVP
HHSVNNYINRLIAKGYKVAICDQVEDPSEAKGIVKRDVVRIITPGTVIDADLLEEKKNNY
LMCLYEGSTGVGISYVDISTGELFSTEITEGNFQQSLQDEISKVQPKEIIYSSENKHVYE
VLYAYQKKLDFYMNEYEDWRFEYQHACKELQEHFKILSVDGLGFHGNHLGVFSTGALIDY
LKNTQKRTLNHLNKVQIYTLNTTMILDFTTRRNLELVETIRDKKKKGSLLWVLDKTMTSM
GGRMLRKWLEEPLLDVKKIHDRLNAVEVIKEDILLRKELKEAFKNIYDLERLSGKISYGS
VNARDLIALKNSLMSIPKIKEILCSQESCLLQNLQSQINEHREITTLIEKAILDEPSPNI
KEGNMIKDGFHRDLDELRRASKEGKLWISSLEAKERDKTGIKSLKIGYNKVFGYFIEVTK
SNLHIVPKEYIRKQTLANCERYITPQLKEIELKVLGAEEKIILLEYQLFLEIREIIEKEV
PKIQATAHAIAQLDALYSLAEVAYENGYIKPSMNDGEAIHILEGRHPVVEKMLNNNMFIA
NDTYLDQKENGISIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKAAAIGIVDRIFTRV
GASDDLGQGQSTFMVEMSEMANILNNASSKSLLILDEIGRGTSTFDGLSIAWSVVEYISD
VLKCKTLFSTHYHELTEIEGKMKTVKNYRIAVEEEGEDIVFLRKVIEGSADKSYGIQVAK
LAGLPNHVIKRAQEILIGLEEEKNTVQYSQDHKVVKDTISETSEQLNFTAFNNEEVIREL
KGLNLMETTPMEALNILYQLHKKVINL
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacaatacacagatatcaaaaacctatataaagatgcattactattttttaga
ttaggagatttttatgaactattttttgatgatgccattacagcctcgagagagctggag
atagccctcacgggaagggattgtggcttagatgaaagggcacctatgtgtggtgtgcct
catcattcggtaaataactatattaatcgtttgatcgcaaagggctacaaagtagccatc
tgcgatcaggtagaagacccttcggaggcaaaggggattgtaaagcgagatgttgtaaga
ataattacgcctggaacagtgatagatgcagatttattagaagaaaagaaaaataattat
ttaatgtgcctttatgaaggaagtacaggcgtgggaataagctatgttgatatttctacg
ggagaattattttctaccgagattacagaaggaaatttccagcaatctctacaggatgaa
atttcaaaagtacagccgaaagaaattatctattcttcagaaaataaacacgtttatgaa
gttctttatgcatatcagaaaaaacttgacttttatatgaatgaatatgaagattggcgt
tttgaatatcagcatgcatgcaaagaactacaggagcacttcaaaattctttcagtagat
ggattgggttttcatggaaatcacttaggggttttttctacaggtgctctaattgattat
ttaaaaaacacgcaaaaacgcaccttaaatcatcttaataaagttcagatatatacttta
aacactacgatgattttagacttcaccactagaagaaatcttgaattagtggaaaccatc
agggataaaaagaaaaaaggttccttattatgggtactggacaaaaccatgacttctatg
ggggggagaatgcttcgcaaatggctggaagagcccctgctagatgtaaagaaaattcat
gatcgattaaatgcagttgaagtgattaaagaagatatcctattgagaaaagaattaaaa
gaagcatttaaaaatatctatgacttagaaagactctctggaaaaatatcttatggtagt
gtgaatgctagggatttaattgctttaaaaaattccttaatgagcattcctaaaataaaa
gaaattttatgcagccaagaatcttgcctgctacaaaacttgcaatcccagatcaatgag
caccgagagattacaaccttaattgaaaaagccatcttagacgaaccttcccctaatatc
aaagaaggaaatatgataaaagatggatttcatcgagatcttgatgaattgagaagggct
tccaaggaaggtaaactatggattagtagtttagaagcaaaagaacgagacaaaacaggt
atcaagtcattgaaaatagggtataataaggtttttggctatttcattgaagtgacaaaa
tctaatcttcacattgtccccaaagaatatatccgaaaacaaacccttgcaaattgtgaa
agatatattacgccacaactaaaggaaatagaactaaaagttctaggtgccgaagaaaaa
ataattttattggagtatcagctttttcttgagatacgggaaatcatagaaaaagaagtt
cctaaaattcaagcaacagcccatgccattgcgcagctagatgccctctactctttggca
gaggttgcttatgaaaatggctacataaaaccatcaatgaatgatggagaagcaattcac
attcttgagggaagacatcctgtagtagaaaagatgttaaataacaatatgtttatagca
aatgacacctacctagatcagaaggaaaacgggatatccattataactggtcctaacatg
gcaggaaaatcaacctatatgagacaagttgctttgattgttcttatggcacagattgga
tcttttgtaccagctaaagcagctgccatcggtatcgttgataggatttttactagagta
ggcgccagtgatgatttgggacaaggccaaagcacctttatggtagaaatgagtgaaatg
gcaaatattttaaacaatgcttcttctaaaagtttattaatattagatgaaattggaaga
ggcaccagtacttttgatggattaagtatagcttggtctgtggttgaatacattagtgat
gttttaaaatgtaaaaccttattctccacccactaccatgagttgacggaaatagaagga
aagatgaaaactgttaagaattaccgtattgctgttgaagaagagggggaagatattgtc
tttttaagaaaggtcatcgaaggaagtgctgataaaagttatggcatccaagttgcaaaa
ttggctggacttcctaatcatgttattaaaagagcacaagaaatcctcatagggctagag
gaagaaaagaatacagtacaatatagtcaagatcataaagttgttaaagataccataagc
gaaacaagtgaacaattgaactttacagccttcaataatgaggaggtaatcagagaactt
aaaggactaaatcttatggaaacaacacccatggaggcattgaatatactttatcagttg
cataaaaaggtcattaatttatag
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