KEGG   Clostridium formicaceticum: BJL90_16210
Entry
BJL90_16210       CDS       T05005                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
cfm  Clostridium formicaceticum
Pathway
cfm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BJL90_16210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfm03019]
    BJL90_16210
Messenger RNA biogenesis [BR:cfm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BJL90_16210
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2
Other DBs
NCBI-ProteinID: AOY77256
UniProt: A0A1D9FPI9
LinkDB
Position
complement(3484377..3485918)
AA seq 513 aa
MNNGLIILIVLVAAIVGCLIGYFIRKNIAEGKINSAEELAKKLVEEAEKDAETSKKEILL
EAKEEVHRLRNEFDRESRERRNELQKIERRLIQKEETLDKKSDVLEHKDEKLNRKLKELE
EQEQEIQQLYEKEVQKLEELSGLTSLEARELLLNDIEKEIKHEAAIMIKDIETKAKEDAE
KKAKEIITYAIQKCAADHVAETTVTVVQLPNDEMKGRIIGREGRNIRTLETLTGIDLIID
DTPEAVILSGFDAIRREIARLALEKLIVDGRIHPARIEEMVEKAKREVDNIIKEEGEQAT
FDTGVHGLHPELIKLLGRLKYRTSYGQNVLKHSIEVSYLAGIMAAELGVDVKLAKRAGLL
HDIGKAVDHEIEGTHVEIGMELLRKYKESKEVIHAMSTHHGDYEPETIEAVLITAADAIS
AARPGARRETLESYIKRLEKLEEIANAYDGVEKSFAIQAGREIRIMVKPEQYNDEEIVVL
ARGITKRIESELEYPGQIKVHVIRETRAIEFAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
attaataatggtctaatcatactcatagttttagttgctgctatagtaggatgccttatc
ggctattttatccgaaaaaacattgcggagggtaagataaacagtgctgaagaactagca
aaaaaattagttgaagaagcagaaaaagatgctgaaacatcaaaaaaagaaattttgcta
gaggccaaagaagaagttcataggcttcgtaatgaatttgaccgagaaagtagagaaagg
cgtaatgagctacaaaaaattgaaagaaggctaattcaaaaagaagaaactttagataaa
aagtcagatgttttagaacataaagacgaaaagctaaatcgaaaacttaaagaattagaa
gagcaagagcaggaaattcaacaactttatgaaaaagaagtccaaaagttagaagaatta
tctggtttaacgtctttagaagcaagagaacttcttttaaatgacattgaaaaagaaatt
aagcatgaagcagcaattatgatcaaggatatagaaacaaaggcaaaagaagatgctgag
aaaaaagccaaagaaattattacttatgccattcaaaaatgtgctgcagaccatgtggct
gaaacaactgttactgtagttcaattgcccaatgacgaaatgaagggaagaattatagga
agagaaggtagaaacattagaacgctagagactttaacaggtattgacttgattattgat
gatacgcctgaagctgtaatattatcagggtttgatgcaattcgacgtgaaattgctaga
ctagctttggagaagctaattgttgatggtagaattcatccggctagaatagaagaaatg
gttgaaaaggctaaaagagaagttgataatattatcaaggaagaaggagagcaagcaacc
tttgatactggggttcatggcttacatcctgaactgattaaactattaggaagattaaag
tatagaacaagctatggtcaaaatgtattaaaacactctattgaagtatcttatcttgca
ggaattatggcggcagagttaggtgtagatgtgaaactagctaagagagctggattgttg
catgatatcggcaaagcagtagatcatgaaattgaaggtactcacgtggagataggaatg
gagcttcttagaaagtacaaggaatcaaaagaagtcattcatgctatgtctacacatcat
ggggattatgaaccggaaacaatagaagctgtgttaattacagcagcagatgctatatca
gctgccagaccaggggcaagacgtgaaacattggaatcctacattaaacgacttgaaaag
cttgaagaaattgctaacgcatatgatggggttgaaaaatcttttgctatacaagctgga
agagaaatcagaattatggttaagccggagcaatataacgatgaagaaatcgtagtatta
gctagaggtattactaaacgtattgaaagtgagttagaatatcctggtcaaataaaagtt
cacgttatcagagaaacaagagctatagaatttgcaaagtaa

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