Clostridium formicaceticum: BJL90_16305
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Entry
BJL90_16305 CDS
T05005
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cfm
Clostridium formicaceticum
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfm03016
]
BJL90_16305
Enzymes [BR:
cfm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BJL90_16305
Transfer RNA biogenesis [BR:
cfm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BJL90_16305
Prokaryotic type
BJL90_16305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
CsgH
Motif
Other DBs
NCBI-ProteinID:
AOY77272
UniProt:
A0AAC9WGG7
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All DBs
Position
complement(3507775..3508659)
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AA seq
294 aa
AA seq
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MKGILNILKPPGMTSHDVVARVRKKTKIKKVGHTGTLDPNAAGVLPICIGQATKISQFLL
DSTKQYRAELTLGIETDTQDIYGNTIEKKVVKLSSDEIEKTILSFVGEYYQTPPMYSALK
VKGKKLYELARQGIEISREARKVQIHQINIIRMMGEKVLFDVVCSKGTYIRTLCHDIGKI
LGCGGVMSFLLRTATHNFDIGSAITLEELQQTEDVEAYLKPIDFPLSHILKIDFDAAYKK
AALNGNKLYIKDSFYSIPMETEVRIYVEENFIGIGNIKEDSEKKRYVKFSRLFA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttgaagggtattttaaatattttaaaacctccaggaatgacttcccatgatgtagtagct
agggtaagaaaaaaaacaaagataaaaaaagtaggacacacaggaactttagaccccaat
gcagctggggttttacccatatgtatcggacaagctacaaaaatttctcagtttttattg
gatagtacaaagcaatatagagctgaattaaccttaggcattgaaacagatacacaagat
atttatggcaatacgatagagaagaaggttgtaaagctttcttccgatgaaatagaaaaa
actatcttaagctttgttggagaatattatcaaacgcctcccatgtactcagcgttaaaa
gtaaagggcaaaaaattatatgagttggcaagacaaggaatagaaataagtcgtgaagct
agaaaagtacaaatccatcaaataaacattattcgtatgatgggagagaaagttttattt
gacgtggtctgttccaaaggaacttatattaggaccttatgtcatgatattggaaagata
ttaggttgtggaggtgttatgtcctttttactacgcacagccacccataactttgacata
ggctctgcaattacattagaagaactccaacaaacagaggatgttgaagcctatcttaag
cccattgactttcccttaagtcatatacttaaaattgattttgatgctgcctataaaaaa
gcagctttaaatggcaataaactatatataaaagacagcttttattccattcctatggaa
actgaagtaagaatctatgtagaggaaaactttataggtattggtaatatcaaagaagac
agtgaaaaaaagcgatatgttaaattttctaggctgtttgcttaa
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