Clostridium formicaceticum: BJL90_19370
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Entry
BJL90_19370 CDS
T05005
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cfm
Clostridium formicaceticum
Pathway
cfm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BJL90_19370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfm02000
]
BJL90_19370
Transporters [BR:
cfm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BJL90_19370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
LPAM_1
Glyco_hydro_97
Motif
Other DBs
NCBI-ProteinID:
AOY77830
UniProt:
A0AAC9WH11
LinkDB
All DBs
Position
complement(4157399..4158628)
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AA seq
409 aa
AA seq
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MNLLKKIIFMLTIVLILSGCSSEGNQTDNPELTTWEDLLNYGKNKEVAILMWGGNDSVNK
YMDGYVSKSVKEKYGITLKRIPMNASEFMNKLLNEKKAALNPGSADLVWINAENFRTAKN
GGLLWGPFTDLLPNLNQYYDLQASDLNYDTGIPIEGYEAIWGRAQLVFTYDSKYVQEPPK
SFQELMEWVKENPGKFTYPKLPDDFVGAAFIRTAYYELVGNNDAFLKDMNQEKFKELSKP
VIDYFKEMNPYLWREGRAFPVSQAQQDELFKNGEIYMTMGFEIGKTAGLVKAGVYPETVQ
TYVFDTGTIGNSHYLAVPFNSPNKAAALLVIDFLQSPEAQIEKLKPEVWGDMPAFSTNKL
ETIMLSDLETVESDPAFISMEFLANRRLPEVQSKYIDWIKELWTEEVGG
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaacctacttaagaagataatatttatgctgacaatagtgctaattttatcaggctgc
agcagtgagggaaatcaaactgataatccagaactaaccacatgggaagacctattgaac
tatgggaaaaataaagaagtggctatcctcatgtggggtggcaatgatagtgtaaataaa
tatatggatggatatgttagtaaaagtgttaaagaaaaatatggtattaccttaaaaagg
atacccatgaatgcatctgaatttatgaataagctgttaaatgaaaagaaggcggcatta
aacccaggcagtgcagatttagtatggattaatgctgaaaactttaggacagctaaaaat
ggtggtctgctttggggaccctttacagatttattgccaaatttaaatcaatattatgat
ttgcaggcatctgacttaaattatgacacgggaattcctatcgaaggatatgaagccatc
tggggaagggcacagcttgtttttacctatgactctaaatatgttcaagaaccacctaaa
tcctttcaagagctaatggaatgggtaaaggaaaatccaggtaagtttacctatcctaag
cttcctgacgattttgtaggagcggcatttataagaacggcttattatgaacttgttgga
aataatgatgcttttctcaaggatatgaatcaagaaaaattcaaagagctttcgaagccg
gtcatagactactttaaggagatgaatccttacctttggagggaggggagagcatttcca
gtatctcaagctcaacaggatgaattattcaaaaatggtgagatttatatgactatgggc
tttgaaattggaaaaactgctggtttagttaaagcgggggtttatcccgaaacagttcag
acctacgtttttgatacaggaaccattggaaactctcattatttagctgtaccctttaat
agtcccaataaggcggcagctcttttagtaatagatttccttcaaagtccagaagctcaa
atagagaagttaaagccggaggtttggggagatatgcctgccttttccaccaataaactg
gaaactataatgttaagtgatttggaaactgtagaatcagatcctgcttttattagtatg
gagtttctagccaatagaagattaccagaagtgcagtcgaaatatatagattggataaag
gagctttggactgaagaggtaggagggtag
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