Andreesenella formicacetica: BJL90_19735 Help Entry BJL90_19735       CDS       T05005                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism cfm  Andreesenella formicacetica Pathway cfm02020   Two-component system cfm02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:cfm00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     BJL90_19735  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     BJL90_19735  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cfm03021]     BJL90_19735 Transcription machinery [BR:cfm03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      BJL90_19735 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID RepL Sigma70_r3 Sigma70_r4 HTH_3 Sigma70_r4_2 HTH_11 HTH_IclR HTH_20 Seadorna_VP6 LacI MarR HTH_5 HTH_31 Motif Other DBs NCBI-ProteinID:  AOY77894 UniProt:  A0AAC9WH40 LinkDB All DBs Position complement(4235892..4237280) Genome browser AA seq 462 aa AA seqDB search MKMGYNLHLEQSQKLIMTPQLKQAIKILQLATFELDQYIQHQVEINPILEVTPPPKEDKY TAEVEKRLEEKINWKEYLEDFNNYEYSKPSYNEDNQFNYENIVSTNTTLQEHLLFQYNIA VLDYRYKEIGEYIIDNLNENGYLIGTVEEIAKELGEEVDTVESILEIIQTFDPAGVAARN LKECLLIQLRQLGINNDDKVCRVVEEYLEEVAQNKYPYVAKKLGIDVKEVQEICDFIRTL EPKPGRKFASVSNHYIVPDAAIKKMGGEYFIILNDKNLPSLTIREDYKKLIASEGEDTEA AKFLNDKLNSAVWLIRSIEQRRQTIYKVVEVIVKKQKNFFEHGKKHLKPLTLKEIAEEIE VHESTVSRATNGKYVDTPMGVFELKYFFSSGVGAADGDGISAESIKNHMREIIEAENPCK PWSDDKIAKLLGERGIMISRRTVAKYREDMQIASSSKRKRYQ NT seq 1389 nt NT seq  +upstreamnt  +downstreamnt atgaaaatggggtataatttacatctagagcagtcacaaaagctgatcatgacacctcag cttaagcaagctattaagattcttcaactagcaacttttgaactagatcaatatattcaa caccaggttgaaatcaatcccattttagaagttacccctcctccaaaagaagataaatat acagctgaagtagagaaacggttggaagaaaaaataaactggaaggaatatctagaggat tttaataattatgagtattccaagcctagttataatgaagataatcaatttaattatgaa aatattgtttctacaaatacaacgcttcaagaacaccttttgttccaatataacattgcg gtcttagactatagatataaggaaatcggtgagtatattatagataatttaaatgaaaat ggttatttgattggaacggttgaagagattgcaaaggaacttggggaagaagtagatacg gtggaaagtattcttgaaatcattcaaacctttgatccagcgggtgtagctgcacggaat ttaaaagagtgtttattgatacaattaagacagttaggtataaacaatgatgataaggtt tgcagagttgtagaggaatacctagaggaagttgcacagaacaaatacccttatgttgct aaaaagctaggtatagatgtgaaagaagtgcaggagatatgtgattttataagaacttta gagccaaaacccggtagaaagtttgcttctgtgagtaatcattatattgtgccagatgca gctattaaaaaaatggggggcgaatactttattattttaaatgataagaatctgccatca ttgaccattagggaagattataaaaaactcattgccagtgagggtgaagatactgaggct gcaaagtttttaaatgataaactcaactctgctgtttggttgattagaagtattgagcaa agaagacaaaccatctataaagtagtagaagtcattgtaaaaaaacagaaaaactttttt gaacatggaaaaaagcatcttaagcctttgacattgaaggagattgctgaggaaattgaa gttcatgaatctactgttagtcgtgctacaaatggaaagtacgtagatacgcctatgggg gtctttgaattaaaatatttcttttccagtggcgtaggagcagctgatggagatggcatt tctgctgagagtattaaaaatcatatgagggaaatcattgaggcagaaaatccttgtaaa ccatggagcgatgataaaatcgctaagcttttaggtgaacgaggcattatgatttcaagg aggacagttgcaaaatatagagaagatatgcaaattgcatcttcttcaaagcgaaaaaga tatcaataa

DBGET integrated database retrieval system