Corynebacterium falsenii: CFAL_03620
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Entry
CFAL_03620 CDS
T03037
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cfn
Corynebacterium falsenii
Pathway
cfn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFAL_03620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfn03019
]
CFAL_03620
03400 DNA repair and recombination proteins [BR:
cfn03400
]
CFAL_03620
Enzymes [BR:
cfn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFAL_03620
Messenger RNA biogenesis [BR:
cfn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFAL_03620
DNA repair and recombination proteins [BR:
cfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFAL_03620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_IclR
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AHI02801
LinkDB
All DBs
Position
840000..842123
Genome browser
AA seq
707 aa
AA seq
DB search
MPEHHDSTGAPGSESLRAEARSILRDLTGNDAADFRDGQFEAIEALVAKHQRVLVVQRTG
WGKSAVYFVAARILRQRGAGPTVIISPLLSLMRDQVAAASRAGVRAATINSSNVTEWQEV
VAQLNSNELDVLLISPERLNNPRFRNEVLGQLLSSLGMIVVDEAHCISDWGHDFRPDYRR
IGTLLSELPAELPVLATTATANERVVDDVATQLGQSTRVIRGGLARDSLRLGVMPTQPMA
RRIAWLQQHLGELAGSGIIYVLTVSAAEDVARAISEAGWQVAAYTGRTDAEDREVLERRL
QDNDVKALVATSALGMGFDKPDLGFVIHLGAPSSAVAYYQQVGRAGRATEHADVLLMPGA
EDPDIWEYFATASMPDEEEANAVLGALRDSQGPLSIPAIEPMVGIKRSRLTLLMKTLQVD
GAVEQVQGGFIATSRPWTYDAQRYAAVAEARQREAQGMIEYERSSTCRMRWLAEALDDPR
ARDCGRCDNCTAPWWDADVDDAATEKIRGELGRIGQPIDPRAQWPTGLPKVGLELKGKIP
GEERSEEGRFIARFTDLGMGQQLREFLKPGGEDGPVTRSLAQACITVLSEWNWVERPEVV
VSMPSDDRPRSLRSLAEGLATVGRLTDAGALSYISDPGPRDVNSAYRVRNLAASLHVPDH
VADAVRGKVVLLVDLDFSSRWGFAWAARLLRLAGARAVLPFALAQRG
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacaccacgactccaccggggctcctgggtccgagagcctgcgcgccgaggcc
aggtcaatcctccgcgacctgaccgggaacgacgctgccgacttccgcgacgggcagttc
gaggccatcgaggcgctcgtcgccaagcaccagcgagtgctcgtggtgcagcggacgggg
tggggcaagtcggccgtgtacttcgtagccgctcggattctccgacagcgcggcgccggc
cccacggtcatcatctcgcccctgctgtcgctaatgcgagaccaggtcgccgcagcgagc
agggcaggggttcgggccgcgactatcaattcctccaacgtcacggagtggcaagaggtc
gttgcgcaactcaactccaatgagctggatgttctgctcatctctccagaacggctcaac
aacccacggttccgcaacgaggtgctgggccaacttctcagcagcctcggcatgatcgtg
gtcgacgaagctcactgcatctctgactggggtcacgatttccgccccgactatcggcgc
atcggcacgctgctctcagaacttcccgccgaactccccgtgctggccacaactgcgacc
gccaatgagcgggtggttgacgacgtcgccacgcaactgggtcagtcaacacgcgtgatc
cgcggtgggctcgcccgggattcgttgcggttaggtgtgatgcccacgcaacccatggcg
cgaagaattgcctggctgcagcagcacctgggggaactggccggcagcggaatcatctac
gtcctcaccgtgtctgcggccgaggacgtcgcacgcgcgatctccgaggccggttggcag
gtagccgcatacacagggcgaaccgatgcggaggaccgggaagttctggagcgcaggctc
caagacaacgacgtcaaggctctcgtggcaacgagcgccctgggcatgggcttcgacaag
ccagacctcggcttcgtgattcacctgggtgcgccatcgtctgccgttgcgtactaccag
caggttggtcgcgcggggcgcgccaccgagcacgcggacgtgctcctcatgccaggcgcg
gaggatcccgacatttgggagtacttcgcgaccgcatccatgccggatgaggaggaggcc
aacgctgtgctcggcgctctccgtgactcccaggggccgctatccatcccagccattgag
ccaatggtgggaatcaagcgcagtcggctgaccttgttgatgaaaacgctgcaggtcgat
ggggcggtcgagcaggtacaaggtgggttcatcgcaaccagccggccgtggacctacgac
gcacagcgctacgctgccgtggccgaggcacgccagcgagaagcccaggggatgattgag
tacgagcggagctccacctgccgaatgcgctggttagccgaggctcttgatgaccctaga
gctcgcgattgcggtcgctgcgataattgcaccgcgccctggtgggacgccgacgttgat
gacgccgccacggagaagatccgaggggaactcggccggatcggtcagcccattgacccg
cgcgcgcaatggccgacgggtcttccgaaggtgggactggagcttaagggcaagattcct
ggcgaggagcgcagcgaggaaggtcgattcatcgcacgcttcacagatttgggcatgggg
cagcagttgcgggaattccttaagccgggcggcgaggatggtcctgtgacgcgctcgcta
gctcaagcgtgcattacggtcttgtcagaatggaactgggtggaacgccccgaggtcgtg
gtgagtatgccgagcgatgatcgaccgcggtcgctgcgatccttggcagaagggctcgcc
accgtgggccgccttacggatgcaggtgcactgagctacatcagcgacccgggcccgcgg
gacgtcaacagtgcctaccgagtacgcaacctagctgcgtcgctgcacgtccctgatcat
gttgccgacgcggtcagaggcaaggtggtgttgctcgtggatctcgatttctcgtcccgc
tggggttttgcatgggcagcccggctgctccggctcgcgggggcacgagccgtcttgcca
tttgcgttggcgcagcgagggtaa
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