Corynebacterium falsenii: CFAL_05295
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Entry
CFAL_05295 CDS
T03037
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cfn
Corynebacterium falsenii
Brite
KEGG Orthology (KO) [BR:
cfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfn03019
]
CFAL_05295
Enzymes [BR:
cfn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CFAL_05295
Messenger RNA biogenesis [BR:
cfn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CFAL_05295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
YlqD
MTR4-like_stalk
Motif
Other DBs
NCBI-ProteinID:
AHI03087
LinkDB
All DBs
Position
complement(1212344..1215070)
Genome browser
AA seq
908 aa
AA seq
DB search
MAHIINSSALGDYPQQVREFAAGYDFPLDEFQLSAASSIAQGRGVLVAAPTGAGKTIVGE
YAVYAAFHNDGTCFYTTPIKALSNQKYHDLVRRYGPEDVGLLTGDVTLNGDAPIVVMTTE
VLRNMIYAESDRLDTLTHVVMDEVHFLSDKSRGPVWEEAILNLDPRVILVSLSATVSNVE
EFGGWLSTVRGETDIIVTEKRPVPLNQFMMVGRHILPLFEGDQQHIGAINRKVVAAAAKA
EETGKRRGPKRADVVQHMAAAGMLPAIYFIFSRIGCDSAVKQLLLDRVDFTTEADRKEIL
RTVDEGVADLSEEDLNVLGFRQWRRALSCGFAAHHAGMLPAFRHIVEDLFSRGLLKVCFA
TETLALGINMPARSVVLEKLTKFNGEEHADLTPGQYTQLTGRAGRRGIDTKGNAVVLWSQ
GLDPYGVADLASTRTYPLDSTFRPGYNMAVNLVNTLGLEDAHRLLLRSFAQYQANGSIVE
QAEQVEKRRRELADMEKQLKREIAHQRRQEHDRDRDFELVVEYAGLRRKLSQEERRAKRE
AVDERSQETIKLLQSLNTGDVIALPTGKNPMTAVVVRSDSAPHFPRPTIITEDGWVERVN
PDMFGNTPVVVGHMRLNRGVSRAPKRQARSVAANLRRLNVDKPKRLKPRAKGNTAQTQVF
RDQVHMHPVHAWEGREDLTRAAEQFLKAQRRLAFQLDETTPNTDSLSSQFNRILLLLQEL
DYVELDIDPATGDPTSASITMEGARLARVHHESDLLVAQCLRRGIWDQLDPAELAAAVSC
CVFENRRETENSMEVPTEELSDAISQTLRIYQELSSDERRHNLSVTREPELGFATAAHQW
TAGAPLEYCLLAAEASGASLTPGDFVRWCRRVIDLLEQIKHTGYSDEVKAASRAAVKAMK
RGVVALDA
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggcacacattattaattcttccgccctcggcgactatccccagcaagtgagggagttc
gccgctggatacgatttcccgcttgatgaattccagctctccgcagcgtcgtccattgcg
caaggccgcggagttctcgtcgccgcacccacgggtgcaggcaagaccatcgtgggggag
tacgccgtgtacgccgccttccacaacgatggaacgtgcttctacaccacgccgatcaag
gcgctgagcaaccagaagtaccacgacctcgtccgccgctacggcccagaggacgtcggc
ctgctcaccggtgatgtcacgcttaatggcgatgctcccatcgtcgtgatgaccaccgag
gtcctgcgcaacatgatctacgccgagtcggatcgcctcgataccctcacccatgtggtg
atggacgaggtgcacttcctctcggacaaatcccgcggcccggtgtgggaagaggccatc
ctcaacctcgatccgcgcgtcattctcgtgtcattgtccgcgacggtgtccaacgtcgag
gaattcggtggttggctatccaccgtgcgtggcgaaactgacatcatcgtcaccgaaaag
cggccggttcctctgaaccagtttatgatggtgggtcggcacatcctgccgctgttcgaa
ggagatcagcaacacatcggcgcgatcaaccgcaaggtcgtggccgccgcggccaaggca
gaggaaacaggcaagcgccgcggccccaaacgcgccgacgtggtgcagcacatggccgcc
gcgggaatgctgccggcgatctacttcatcttctcccgcatcggctgcgatagtgcggtc
aagcagctcttgctcgaccgggtggatttcaccaccgaggccgatcgcaaagagatcctc
cgcacggtcgatgagggcgtggccgacctgtccgaggaagacctcaacgttctcggattc
cgccagtggcgccgggcgctgtcctgcggttttgcggcccaccacgccggcatgctgccc
gcgttccggcacatcgtggaggatttgttctctcgggggctgctcaaggtgtgcttcgcc
accgaaaccttggcgttgggtatcaacatgcccgcccgctcggtcgttctggaaaagctg
accaagttcaacggcgaggagcacgcagatctcacacctgggcagtacacgcagctgacc
ggtcgtgcgggtcggcgcggcatcgataccaagggcaatgccgtggtgttgtggagccag
ggcttggatccctacggggtggcggatttggcctccacccgcacgtatccgctggattcc
acgttccgtcccggctacaacatggctgtgaacctggtgaatacattgggtctggaggac
gcacaccgcctgctactgcgttctttcgcgcagtaccaggccaacggctccattgtggag
caggccgagcaggtggaaaagcgccgccgcgagctcgcggacatggaaaagcagctcaag
cgcgaaattgctcatcagcgccgccaggaacacgaccgggaccgcgatttcgagctcgtt
gtggagtatgccgggcttcgccgcaagctcagccaggaggagcgccgcgccaagcgtgag
gccgtcgatgagcgctcgcaggagaccatcaagctgctgcagtcgctcaacacgggcgac
gtgattgccctgcccaccggaaagaaccccatgacggccgtggtcgtccgttccgattcc
gctccgcatttcccgcggccgaccatcatcaccgaggacgggtgggtggagcgcgtcaac
ccggacatgtttggcaacacgcccgtggtcgtggggcacatgcgcctgaataggggtgtg
tctcgcgccccgaagcgccaggcccgcagcgtggccgcgaatctgcgccgcctgaacgtg
gataagccgaagcgcctcaagccccgtgccaagggcaatacggcccagactcaggtgttc
cgcgaccaggtgcacatgcacccagtgcacgcgtgggagggtcgcgaagacctgacccga
gctgcagagcagttcctcaaggcccagcgccgcctggctttccagctggacgagaccacg
ccgaacaccgattcgctatcgagccagttcaaccgcattttgttgctgctacaggagcta
gattacgtggagctggacattgacccagccaccggtgatcccacgtccgccagcatcacg
atggagggtgcccgtctggcgcgggtgcaccacgagtccgatctcttagtcgcgcagtgc
ttgcgccgcgggatctgggatcagctcgatccagccgagctcgcggcggcagtgagctgc
tgcgtgtttgagaatcgccgggagacggagaactcgatggaggttcccaccgaggagctc
tccgatgcgatctcgcagaccttgcgcatttatcaggagctcagctctgatgagcgacgc
cacaatctgtcggtgacgcgcgagcctgagctgggctttgccaccgcggctcatcagtgg
acggcgggtgcgccgctggagtattgtctcttggccgccgaggcctccggcgcatcgttg
accccgggcgatttcgttcggtggtgccgccgcgtcatcgacttgttggaacagattaag
cacactggctattcggacgaggtcaaggccgcctcccgcgcggctgtgaaggctatgaag
aggggagttgtggcactcgatgcctaa
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