Corynebacterium falsenii: CFAL_07430
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Entry
CFAL_07430 CDS
T03037
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cfn
Corynebacterium falsenii
Pathway
cfn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFAL_07430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfn03021
]
CFAL_07430
03019 Messenger RNA biogenesis [BR:
cfn03019
]
CFAL_07430
Transcription machinery [BR:
cfn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CFAL_07430
Messenger RNA biogenesis [BR:
cfn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CFAL_07430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AHI03466
LinkDB
All DBs
Position
complement(1734950..1736800)
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AA seq
616 aa
AA seq
DB search
MSLSDILARGQANGLASLKLPELRQIAAAQGLRGTSGLRKGDLIAAIESAGTGGGAPRQK
PKQEPKQESRQGDSSNAADAGHADSAGDQPDRQQQERQDRQERRERHRNPNNRGDRSNDR
GGDADVAASNDNDNSGNSSNSNNSENNGERNNDRNNDRNNDRGHDRNGERGNRRNRRNRR
NRRGRGRDRDNNRNDQRDSNRDNRDNRDNRDNNRDNNNDRDNQASENLAPVAGILDFADA
NTAFIRTTGYHAGSTDVYVPINTVRKYGMRHGDAITGTIKPRNNNNNNQGGGRGRNRQNY
TPIHQVETVNGLTPEQAAQRPHFSKLTPLYPNQRLRLETEPKILTTRVIDLIMPIGKGQR
ALIVSPPKAGKTTILQDIANAIATNNPECYLMVVLVDERPEEVTDMQRSVHGEVISSTFD
RPPGEHTAVAELAVERAKRLVEQGKDVVLLLDSITRLGRAYNNSSPASGRILSGGVDSNA
LYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKIAERR
VFPAVDVNPSGTRKDELLLGPEEARIMHKLRRILSALDSQAAIDLLIKQLRKNKTNREFM
MQVASSAPLAGEDEED
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctgtccgatattttggctcggggccaagccaatggccttgcatccttgaagttg
ccagagctgcgccagatcgccgccgcccaaggattgaggggaacctccgggctgcgcaag
ggggatctcatcgcagctatcgaatccgctggtaccggcgggggagcgcctcgtcagaag
cccaagcaggagccgaagcaggagtctcgccagggcgactccagcaatgccgctgatgct
gggcatgcagattccgcaggggatcagccagatcgccagcagcaggagcgccaggaccgt
caggagcgccgcgagcgccaccggaacccgaacaatcgtggtgaccgctcgaatgaccgt
ggtggggatgccgacgtagcggcgtcgaacgataacgataattccggcaactccagtaac
tccaataactccgagaacaacggcgagcgcaacaacgatcgcaataacgaccgcaacaat
gatcgcggccatgatcgcaatggggagcgcggcaatcgtcgcaaccgcaggaaccgtcgc
aaccgccgcgggcgcggccgtgaccgggataacaaccgcaatgatcagcgggacagcaac
cgcgataaccgcgataaccgggacaaccgggacaataaccgcgacaacaataacgatcgc
gacaaccaggcctcggagaacctcgcgccggtcgcgggcatcctcgacttcgcggacgcc
aacacggccttcatccgcaccaccggctaccacgccggaagcacggacgtttacgtgccg
atcaacaccgtgcgcaagtacggcatgcgccacggcgatgcgatcaccggcaccatcaag
ccgcgcaacaataacaacaacaatcagggtggcggccgcgggcggaaccgccagaattac
acgccgatccaccaggtcgagaccgtcaacggcctcaccccggagcaggctgctcagcgc
ccgcacttctccaagctcaccccgctgtacccgaaccagcgcctgcgcctggagactgag
ccgaagatcctcaccacgcgcgtgatcgacctcatcatgccgatcggcaagggccagcgt
gcgctcatcgtctccccgccgaaggccggtaagaccacgatcctgcaggacatcgccaac
gcgatcgccacgaataacccggagtgctacctcatggtcgtgctcgtggacgagcgcccc
gaagaggttacggacatgcagcgcagcgtccacggcgaggttatttcctccacgtttgac
cgcccgccgggagagcacaccgccgtggccgagctcgccgtggagcgcgctaagcgcctc
gtggagcagggcaaggacgtggtgctgttgctggactccatcacccgcctgggccgtgcg
tacaacaacagctcgccggcttccggacgcatcctgtccggtggtgtggactccaacgcg
ctgtacccgccgaaacgtttcctcggtgcggcccgcaacattgaaaacggtggctcgctg
acgatcatcgccaccgccatggtggagaccggctcggccggcgacaccgtgatcttcgag
gaattcaagggcaccggcaacgcggagctcaagctcgatcgcaagatcgcggagcgccgc
gtgttcccggccgtggatgtcaacccctccggcacccgcaaggacgagctgctgctcggc
ccggaggaggcgcgcatcatgcacaagctgcgccgcatcctgtccgccctggattctcag
gccgccatcgatctgctcatcaagcagctgcgcaagaacaagaccaaccgcgagttcatg
atgcaggtcgcatcctccgctccgttggccggtgaggacgaggaggactaa
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