Corynebacterium falsenii: CFAL_10315
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Entry
CFAL_10315 CDS
T03037
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cfn
Corynebacterium falsenii
Pathway
cfn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFAL_10315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfn03021
]
CFAL_10315
03400 DNA repair and recombination proteins [BR:
cfn03400
]
CFAL_10315
Enzymes [BR:
cfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFAL_10315
Transcription machinery [BR:
cfn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFAL_10315
DNA repair and recombination proteins [BR:
cfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFAL_10315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AHI03922
LinkDB
All DBs
Position
complement(2343208..2347176)
Genome browser
AA seq
1322 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAANIITSVDEEGRHNDQSTLEAEMMLEKKEVEADRDADLADRAKTLEDD
LAELEAAGAKADAKRKVQTAAEREMRHIRERAEREIDRLDEIWNTFVKLAPKQMIVDENI
YTELVDRYEDYFTGGMGAEAIQTLIRNFDLEAEAEELREIIRDGKGQKKLRALKRLKVVA
AFLRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMLDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKLMALELFKPFVMKRLVEKSYAQNIKSAKRMVERQR
PEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPILVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYFLTLVKKPGELGGQ
GAYTPATEDAPATGVYSSLAEAIMAYDRGVLGLQAPIRVRINHLRPSAEVEAELFPDGWQ
RGQAWLAETTLGRVLFNELLPWNYPYVEGVMAKKPQATVINDLAAKYPMITVAQTVDKLK
DAGFYWATRSGVTITMHDVLVLPNKQEILDNYEAKARVIEKKMARGKINEAERYQSLVDL
WKEATDFVGQSVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVTNSRGEYITRPVK
TSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTSQGV
VMPVTEPILDAQGNPTGQFIAADFVETSVLGRYLAADAADGDGNVIVAAGDVVGEAELNK
LIAAGIPDVKVRSVMTCATATGVCSTCYGRSMATGKKVEIGEAVGIVAAQSIGEPGTQLT
MRTFHLGGVGGDITGGLPRVQELFEARVPKAKSPIASVDGTVKIEDDDNFYTLTIVPDDG
SEDVVYEKLSKRQGLATLGTGGVERPIRDGDKVKMGQQLLKGAADPHEVLRVMGRRGVQQ
HLINEVQKVYRDQGVAIHDKHIEIIVRQMLRRVTVIDSGSTEFLPGSLVEHADAVAASKE
AVKSGGRPVEVRAEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENV
IIGKLIPAGTGIARYRNISVEPTEEARAAAYSLPTSFGDGFYGDDSYGDFTGAAVPLDDL
DF
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacttcttcgacgagcttcgcattggcctagccaccgctgacgacatc
cgtcgttggtcccgtggcgaggtcaagaagcccgaaacgatcaactaccgtactctcaag
cccgagaaggacggtctattctgcgagcgcatctttggtcccacccgcgactgggagtgt
gcctgcggtaaatacaagcgtgtccgctacaagggcatcatctgtgagcgctgtggtgtt
gaggtcacgaagtccaaggtgcgccgtgagcgcatgggccacatcgagctcgccgctccg
gtgacccacatctggtacttcaagggtgttccctctcgcctgggctacctgctggacttg
gctccgaaggatctggaaaagatcatctacttcgcagccaacatcatcacctccgtggat
gaggagggtcgtcacaacgaccagtccaccctcgaggctgaaatgatgctggagaagaag
gaagtcgaggccgaccgcgacgccgatctggccgaccgcgccaagaccctcgaggacgac
ctcgccgagctcgaagccgccggcgccaaggccgacgccaagcgcaaggtgcagaccgcc
gcggagcgcgagatgcgccacatccgcgagcgcgccgagcgcgagatcgaccgcctcgat
gaaatctggaacaccttcgtcaaacttgctcccaagcagatgatcgtggacgagaacatc
tacaccgagctggtggaccgctacgaggattacttcaccggcggtatgggtgccgaggct
atccagaccctcatccgcaacttcgacctcgaggccgaagctgaggagctgcgcgagatc
attcgcgacggcaagggtcagaagaagctgcgcgccctcaagcgcctcaaggtcgtcgcc
gcgttcctgcgttccggcaacgacccggcaggcatggttctcgactgcatcccggtgatc
ccgccggagctgcgcccgatggtgcagctggacggtggccgcttcgcgacctccgacctc
aacgacctgtaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgctcgacctc
ggcgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtggacgca
ctgttcgacaacggtcgccgtggtcgcccggtcaccggaccgggcaaccgcccgctgaag
tccctgtcggacctgctcaagggtaagcagggccgcttccgccagaacctgctcggtaag
cgcgtggactactccggtcgttccgtgattatcgtcggtccgcagctgaagctgcaccag
tgtggtttgccgaagctcatggcactcgagctgttcaagccgttcgtcatgaagcgcctg
gtggagaagtcctacgcacagaacatcaagtccgccaagcgcatggtggagcgccagcgc
cccgaggtgtgggacgtgctggaagaggccatcgcggaacaccccgtgatgctcaaccgt
gcacctaccctgcaccgcctgggcatccaggcgttcgagcccatcctcgttgagggtaag
gctatccagctgcacccgctggcgtgtgaggcgttcaacgctgacttcgacggtgaccag
atggctgtccacctgccgctgtccgcagaggctcaggccgaggcccgcatcctcatgctg
gcatcgaacaacattctgtccccggcatccggtaagccgctggctatgccccgtctggac
atggttaccggcctgtacttcctcaccctggtgaagaagcccggcgagctcggcggccag
ggtgcctacaccccggcaaccgaggacgcaccggccaccggcgtgtactcctccctggcc
gaggccatcatggcctacgaccgtggcgtgctgggcctgcaggctccgatccgcgtgcgg
atcaaccacctgcgcccgtccgccgaggtggaagcggagctgttcccggatggctggcag
cgcggccaggcctggctggctgagaccaccctgggtcgcgtgctgttcaacgagctgctg
ccgtggaactacccgtacgtcgagggcgtcatggccaagaagccgcaggctacggtcatt
aacgacctcgctgccaagtacccgatgatcaccgttgctcagacggtggacaagctcaag
gatgctggcttctactgggccacccgctccggcgtgaccatcacgatgcacgacgtgctg
gttctgccgaacaagcaggagatcctggacaactacgaggccaaggctcgcgtcatcgag
aagaagatggcacgcggcaagatcaacgaggccgagcgctaccagtccctcgtggacctg
tggaaggaagcgaccgacttcgtgggtcagtccgtggaggacctgtacccggatgacaat
ccgatcccgatgatcgtgaagtccggtgcggccggtaacatgcgccagatctggaccctg
gccggcatgaagggcatggtcaccaactcccgcggtgagtacatcacccgcccggtgaag
acctccttccgtgaaggcctgtccgtgctggagtacttcaacaactcccacggttctcgt
aagggcctggccgatacggctctgcgtaccgcagactccggctacctgacccgtcgtctc
gtcgacgtcgcccaggatgtcatcgtccgcgaggacgactgtggtacctcccagggcgtc
gtcatgcccgtcaccgagccgattctggacgctcagggcaacccgaccggccagttcatc
gccgctgacttcgtggagacctctgtgctgggccgctacctggccgccgacgccgctgat
ggtgacggaaacgtcatcgtcgccgctggtgacgtggtgggcgaggctgagctcaacaag
ctcattgccgctggcatccccgatgtcaaggtccgctcggtgatgacctgtgccaccgcc
accggcgtgtgctccacctgctacggccgctccatggcgaccggtaagaaggtggagatc
ggcgaggccgtgggcatcgtggctgcacagtccattggtgagcccggtacccagctgacg
atgcgtaccttccacctcggtggtgtgggtggcgacatcaccggtggtctgccgcgtgtc
caggagctgttcgaggctcgcgttccgaaggcgaagtccccgatcgcgtcggtggacggc
accgtcaagatcgaggacgacgacaacttctacaccctcaccatcgtcccggatgatggt
tctgaggacgtcgtgtacgagaagctgtccaagcgccagggcctggcaacgctgggcacc
ggtggcgtggagcgtccgatccgcgatggcgacaaggtcaagatgggccagcagctgctc
aagggcgctgccgatccgcacgaggtcctgcgcgtcatgggccgccgcggtgtgcagcag
cacctgatcaacgaagtgcagaaggtctaccgtgaccagggcgtggccatccacgacaag
cacatcgagatcatcgtgcgccagatgctgcgccgtgtgaccgtcatcgactccggttcc
accgagttcctgccgggctccctcgtggagcacgcggatgccgtggctgcctccaaggag
gccgtgaagtccggtggccgcccggtcgaggttcgcgccgagatcatgggtatcaccaag
gcatcgctggcaaccgagtcctggctgtccgccgcctccttccaggagaccacccgtgtg
ctcacggatgccgcgatcaacaagcgctccgataagctcatcggtctcaaggagaacgtg
atcatcggtaagctgatcccggccggtaccggcatcgcccgctaccgcaacatctccgta
gagcccaccgaggaggcacgcgctgcggcctactcgctgccgaccagcttcggcgatggc
ttctacggcgatgacagctacggtgacttcaccggcgccgccgtgccgctggatgacctg
gacttctag
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