KEGG   Camponotus floridanus (Florida carpenter ant): 105247829
Entry
105247829         CDS       T03919                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X2
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    105247829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfo03021]
    105247829
   03036 Chromosome and associated proteins [BR:cfo03036]
    105247829
Transcription machinery [BR:cfo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     105247829
   Coactivators
    SAGA/TFTC/STAGA complex
     105247829
Chromosome and associated proteins [BR:cfo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     105247829
    STAGA complex
     105247829
    TFTC complex
     105247829
    SAGA complex
     105247829
    SLIK complex
     105247829
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd TFIID_NTD2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_Vps41 WD40_like Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_Nup120_160 eIF2A RMC1_N Cytochrom_D1 Mala_s_1-like Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 105247829
NCBI-ProteinID: XP_011250528
LinkDB
Position
Unknown
AA seq 618 aa
MFVAWFRDCHTILLADPGSRRRRNRRRRWLSINMKRMKSDVISATIESYLKRRHYQANDV
YCKGDQLFCQSSDQMTLNATAECSTSQDNSIVFSAITIDVTAADQAYQRLKKWMTVILNE
KIKVELQGLLYPIFCHLYLEMLHAGNRQAAIQFLKAHQNEFVCDTEKDFLEELSRVFSVQ
DIELRPLVNAFRTRKYKVDLSESAHICLRQYLTKYGHIILMQIINTHITIIRKASSPKMD
GEIHEEKSQRYETSINGHVEQPSGTGVDREMRELQEAIRLIRNNAHQALRIFTVKNAIEN
ASCGLIAPKMDKLAVGFSTAEIRLWGIGETVLVERKNKQTHVPFVCDVSPFYKFNEHESI
RSEAGAILLRGHTDVVHDLRFIPEADILLSVSSDKDMRAWRLNDYSCTAIYSGHSYPIWC
MDTSVFNLYIATGSHDRTAKLWSLDRTFPLRIFAGHFLDVNCIKFHPNARYLATGSADKT
VRLWAKDDGSLVRVHVGAQSTIYTLAFSPDGKYLAAAGDDKCISIWDLASNALLTELKGH
EDTIMNVDWSLDGQYIASASIDGIIRLWPTQDYINTLNGGSSTAMSQSEAQIFSTSCSSI
LSLNYYKKNNSLICIGTA
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgtttgtcgcatggtttcgcgactgtcatacaatcctgcttgcggatcccggttcgaga
cgtcgtcggaatcgtcgtcgtcgttggttatcgataaatatgaagcgaatgaaaagcgac
gtgatcagtgcgacgattgagtcttacttaaaacgacgtcattatcaggccaacgacgtc
tattgcaagggcgatcagttgttttgtcagagcagcgatcaaatgacattaaacgcaacc
gccgagtgcagtacctcgcaggacaactcaatcgttttcagtgccatcaccattgacgtt
accgcggcggatcaagcatatcaacgattaaaaaaatggatgactgttatactcaatgaa
aaaataaaagtagaattacaaggacttttatatccaatattttgtcacctttatttagag
atgttacatgctggtaacagacaagctgcaatccaattcttaaaagcacatcagaatgaa
tttgtctgtgacacggagaaagatttcttagaagaattatctagagtattttcagtgcag
gacattgaattgagacctttggtgaatgcattcagaactagaaagtacaaagtagatctg
tctgagtcagctcatatttgtttaagacaatatcttacaaaatatggacatataatatta
atgcagattataaatacacatattacaataatcagaaaggcaagtagtcctaaaatggat
ggagaaatacatgaagagaaaagtcaaagatatgaaacaagtattaatggtcatgtggaa
cagccatctggtacaggtgttgatcgcgaaatgcgagaattacaggaagcaatacggtta
atacgaaataatgctcatcaagcattaagaatatttacagtaaagaatgccatagaaaac
gcaagttgcggtcttattgcacctaaaatggataaattagctgtaggatttagcacagct
gaaatacgtttatggggtataggtgaaacggttttagttgaacgtaaaaataaacaaacg
catgttccatttgtctgtgatgtatcaccgttttataaatttaacgaacacgaaagcata
agaagcgaagcaggggcgatattattaagaggacacacagacgtagtgcacgatttaaga
tttattccagaagcagacattcttctttctgtatcaagtgacaaggatatgagagcttgg
agactcaacgattattcatgtacagcaatatatagcggtcatagttatccaatatggtgt
atggataccagtgtgttcaatttatacattgccacaggttcacatgatagaactgctaaa
ttatggtcattggataggacgtttcctctaagaatatttgctggtcattttttagatgtc
aattgtataaaatttcatccaaacgcccgatacttagcgactggttctgccgacaaaacc
gtaagattatgggccaaagatgatggaagtttagtacgagtacatgtcggagctcaatcg
accatttatactttagcttttagtcccgacgggaaatatctagctgctgcgggtgacgat
aaatgtatatctatatgggatttagcatctaatgcattactcactgaattgaaaggccat
gaagatacaatcatgaatgtagattggagtttagatggccaatatattgccagtgcaagc
atagatggaataatacgattatggcctactcaggattatattaacactttgaatggagga
tcgtcaaccgcaatgtctcaatcggaagcgcaaatattttcaacatcttgctcaagcatt
ctctcattgaattattataaaaagaataattcgttgatttgtattggcacagcatga

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