Camponotus floridanus (Florida carpenter ant): 105248322
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Entry
105248322 CDS
T03919
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo04140
Autophagy - animal
cfo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105248322
04148 Efferocytosis
105248322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfo04131
]
105248322
Membrane trafficking [BR:
cfo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105248322
Hops complex
105248322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
YlzJ
Motif
Other DBs
NCBI-GeneID:
105248322
NCBI-ProteinID:
XP_011251370
UniProt:
E2A495
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MSAMLTADWFPLGRDIYFRKFELYPISFQQEVSFNNLLVAAPYGGSIAVTRNPKKLVKVQ
GANKPLILLYTSSGKLTARLQWSSGQLISFGWSQQEELLCVQDDGMVLIYDMFGTYQHTF
SMGKDVAKDTKVIDAKFFATSNSTGIAVLTSTNRIFLVNNVSEPKVRPVTDMPRYGGPID
CWCVIHYDRETEVILSNREGIVVIHQSHQNTFPFNNLFSNKINNVIAMAVSGNYRHIALY
ADTGHLYIGSIDFREKYCECYTNMKEPLANIAWCGTEAVVCSWNSAIMVVGRTAENIVYN
YDGPVHLITEIDGVRVLSSCSHEMIQKVPNVVQRIFRINSTDPASYLLEASKQFQKKSHK
ADSYIDLVKDKLDSAIKACIDGASHEFDFETQKILMRAAKFGKGFSKRMDSEYYVQMCRI
LRVLNAVRHPAVGIPLTYTQFNVLTNQVLLDRLVVRRHYYLGIQIARHLQLPEIDGESRI
LAHWACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIAKRAADCGRKQLAIKLIDYEPR
AHQQVPLLLTLGEERAALHKAVESGNTDLVYTVILHLRENMTLGDFQMSIMHCPLAMALY
IKYCQSHNRETLRDIYNQYDDFHSQAVWFITESYQRKNTMSKDALLQSAQENFRLARNDT
NASLTEEQIKLLKYQRSLEDTLHESVVGKPLHDTVKILLLRNELKLADKLRSEYKIPDRR
YWWLKIQCLAEQGLWNDLEKFSKTKKSPIGYEPFIDECLKYNEKLEARKYLMKIKDDLKV
KYLVKLNMLSEAAKTAFDQKDASGLTFVLAQCSLTDRQLVDKINMYLASLKN
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctatgttgactgccgattggtttcctctaggacgagatatatactttcgcaaa
tttgagctgtatccgatatccttccagcaggaagtttcctttaacaatttacttgtggca
gctccttatggaggttctatcgctgtaacgagaaatcccaagaaacttgtcaaagttcaa
ggagctaataagcccttaatattgttatatacatcatcaggaaaattgacagccagattg
caatggagcagtggacaattgatatcatttggctggtctcaacaggaagaattgttatgc
gtacaagatgatggcatggttctgatatatgacatgtttggaacttatcaacatactttt
agtatgggaaaagatgtagctaaggatactaaagttattgacgcaaagttctttgcgaca
tccaacagcactgggatagctgttttaacatctactaatcgcatatttctagtaaacaat
gtatccgagcctaaagtccgaccagttaccgatatgccaagatatggtggaccaattgat
tgttggtgcgtgatacattatgatagggagacagaggtgattttgtcaaatagagaagga
atcgttgtaattcatcagtcccaccaaaacacatttccatttaacaatctcttcagcaat
aaaatcaataatgtgatagcaatggctgtatctggcaattatcggcacattgcactctat
gctgacactggacatttatatattggttcaatagactttagagagaaatattgtgaatgc
tatacaaatatgaaggaacctttggcaaatatagcctggtgtggtacggaagccgtggta
tgcagctggaacagtgcaataatggtagtaggacgtacagctgagaatatagtgtacaat
tacgatggtccggtacacttgattacagaaattgatggagtacgtgtactttcgagttgc
tcccacgaaatgatacagaaagtaccgaatgtcgtgcaaagaatatttagaatcaactct
acggatcctgcatcgtatctcttagaggcttctaagcagtttcagaaaaagagtcataaa
gctgacagttatatagatctagtgaaagataaattggattcggcgataaaggcttgcatc
gatggagcgagtcatgaattcgattttgaaacgcaaaagattttgatgcgtgctgccaag
tttggaaaaggattcagcaaaagaatggattctgaatattacgttcaaatgtgcaggatt
ttgagagttttgaacgcagtaagacatcctgctgtgggcattccactaacatatacacaa
tttaatgttcttacaaatcaagtgctactggacagattagtagttcgaagacattattac
ttaggtatacaaatagcacgccatttacaattacctgaaattgatggggaaagtagaata
ttggcacattgggcttgctacaaggtaaaacaaacgcaattagataaagaacaaatagca
gaggagatagctgataaattaggatatgctcctggtgtttcatacagcgaaattgcgaaa
agggcagctgattgtgggcgaaaacaattggctattaaattaatcgactatgaaccgcgt
gcgcatcagcaagtacccctgctgttgacgcttggcgaagagcgagccgctctgcataaa
gctgtagagagtggtaatacggatttagtctacactgtcattcttcatctcagagaaaat
atgactctcggggattttcaaatgtctataatgcattgtcctttggcaatggcattatat
attaaatattgtcaaagtcataatagagagacattacgcgatatttataatcaatatgat
gactttcattcacaagcagtgtggtttatcactgagagttatcaacgaaaaaacaccatg
tcgaaagatgcattgctacaatctgcacaagaaaattttagattggctcgtaatgataca
aatgcttcattaacagaagaacagataaagctcttaaaatatcagagatctttagaggat
acgctacacgagtcagtcgttggaaagcctctacatgatactgtaaaaatattattattg
cgtaatgagttgaaattagcggataaattacggtccgaatataaaataccagatcggaga
tattggtggttaaagatacaatgtttagcagaacaaggtctatggaatgatttggaaaaa
ttctccaaaactaaaaagtcccccattggctatgagccatttatagatgaatgtctcaag
tataatgaaaaattagaagcaagaaaatatttaatgaaaattaaagatgatcttaaagtg
aagtatctagtaaaattaaatatgctgagcgaagcagcaaagacagcgtttgatcaaaaa
gacgcttcaggtcttacatttgtgttggcgcaatgtagtttgacagacaggcaattagta
gataagatcaacatgtatctagctagtcttaaaaattaa
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