Camponotus floridanus (Florida carpenter ant): 105248622
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Entry
105248622 CDS
T03919
Name
(RefSeq) collagen alpha-1(I) chain
KO
K06237
collagen type IV alpha
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo04512
ECM-receptor interaction
cfo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105248622
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105248622
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfo04147
]
105248622
00536 Glycosaminoglycan binding proteins [BR:
cfo00536
]
105248622
Exosome [BR:
cfo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105248622
Glycosaminoglycan binding proteins [BR:
cfo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105248622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBM_14
Motif
Other DBs
NCBI-GeneID:
105248622
NCBI-ProteinID:
XP_011251812
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MEKVKEYGSSVLVSPTISRSTDDCAKGSISSSFAVSRGSPPRIPRNREKKGGSIWRRSKD
ERQSIPGGGVSALGVLSKDIYTDEVTSTISHCLDLPQHCGVFCTYGSVGFAHSRVLAPAN
MRLRLFWIVLLAVARSALADEGYNYPRPTNGLVPGGPGGGPGTKPGGGFPGMPGRYPSGP
GGPGGPGEPGRPNGYPSGPSGFPSTQPGGQPGGQPGFPSGQGPSGGYPSGRPSIPFPSGE
PTGRPSPGTGPGGYPSGPGTPTGPGAPGGFPTGPSTGYPGGRPNGQAPGGFPGGQRPSGY
PSNGQPETPGYPSARPGGQGPGGRYPEQIPGGYPGGMQKPGGPEGGYPSGRPSGGYPGGA
QRPSGGPGPQGPGGYPGPSGPGGPGGPSTGGYPSTKPGGQRPEGYPSGPSPPGPTPGGYP
GAPGPQGPGPQGPGGFPSGPGSQEPGGFPGGPGPQRPGGFPSGPTAGQPGGPGEYGHGDE
GTYDEGDYSAIPGEPGRDYPIYSEIPETSFRCDAQQFPGYYADVEAQCQVFHICANNKTY
DFLCPNGTIFHQQYFVCVWWNQFDCNSAPSFYNLNENIYDHTIMGTPGQRPGIEGPSGPP
GPGTYPGGPGAPPGAPSGPGYPGGPQRPGGGPGGYPGEPQGPSRPGEYPGEPQGPSKPGG
YPGRPQGPSGPGTYPGGPSGPSGPGTYPGGPSGPSGPGTYPGGPSGPSGPTGPGYPSGPM
GPGGPSGFPGRPGGPQGPSGRPGPGYLTPPVGPSGPQGSQEPGYPGGRPQGPSGPSGRPQ
GPSPSYPGPSGPSPGYPSGQPQGPPGPPSYPGPGTPSGRPQGPSGPGGYPSGRPSGPSFP
SGPSGPTGPGTSPFPPQGPPKPDREYLPPRIG
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggtcaaagagtacggaagcagcgtcctcgtctctcctacgatttccagaagt
acagatgactgcgcgaaaggatcaatctcatcgtcattcgcggtttcgcgtggttcccca
cctcgtatcccgaggaacagagaaaaaaaagggggctcgatctggaggaggtcgaaggat
gagcgccagagcatccctggtgggggcgtatcagcactcggggtgctatccaaggatata
tataccgacgaagttacttccaccatcagtcactgtctcgacttacctcagcactgcggt
gtgttttgtacgtacggatcggttggattcgcccactcgagggtgcttgcgccagcaaac
atgcggctacgcttgttctggatcgtcttgctggctgtcgctcgttcagctctggctgat
gagggatataattatcccagaccaacaaatggacttgtgccaggtggtccaggaggaggt
cctggcactaagccaggagggggatttccaggaatgcccggtagatacccatctggccct
ggaggacctggaggacctggagaaccaggaagaccgaatggttatccatcaggtccgtca
ggatttccaagtacacaaccaggtgggcaaccaggtgggcaacctggatttccatctggt
caaggcccttccggtggataccctagtggacgaccttccatcccatttccgagcggtgaa
ccaacaggcagacctagtccaggaacaggcccaggtgggtatccatctggaccaggtaca
ccaacgggacccggtgcaccaggaggatttccaacagggccaagcactggatatcctggt
ggcaggcctaatgggcaagcaccaggcggttttccaggtgggcaaagaccttctggatat
ccgagtaacggacaaccagaaactccaggctatcctagtgcacgaccgggcgggcaagga
ccaggcggaagatatcccgaacagattcctggaggctatcccggtggaatgcagaagcct
ggtggcccagaaggtggatatcctagtggaagaccaagcggtggctatccaggaggtgct
cagagacctagcggtggtccaggtcctcagggaccaggtggatatccaggaccgagtggc
cctggaggtccaggtggaccatctaccggcggttaccctagtactaaaccaggaggacag
agaccagaaggctatccgagtggcccaagtccacctggcccaacaccgggcggttatcct
ggtgctccaggaccacaaggtccgggaccgcaaggaccaggaggatttccaagtgggcca
ggatctcaagaaccaggaggatttccaggtggaccaggtccgcaaagaccaggaggattt
ccgagtggaccaactgctggccaacctggaggacctggggaatatggccatggtgatgaa
ggaacatatgatgaaggtgattactcagctattccaggcgagcctggtcgcgattatcct
atatatagtgaaattccggaaaccagttttcgttgcgatgcgcaacaatttcctggttat
tacgctgatgtggaagctcagtgccaagtttttcacatatgtgccaataataaaacctac
gactttctttgtccgaacggaacaattttccatcaacaatactttgtctgtgtatggtgg
aatcaatttgattgtaactccgcgccaagtttttataatttaaatgaaaacatttacgat
catactattatgggaacacctggtcaaagacccggcattgaaggaccttcaggacctcct
ggacctggtacatatccaggaggtccaggtgctcctcctggtgctccaagtggcccgggt
tatccgggaggaccgcaacgtcctggtggtggtcctggaggttatcctggagaacctcaa
ggtccatcgagaccaggcgaatatccaggagaacctcaaggcccatcaaaaccaggcgga
tatccgggaagacctcaaggtccatcaggaccaggtacatatccgggaggaccttcaggt
ccatcgggaccaggtacatatccaggaggaccttcaggtccatcgggaccaggtacatat
ccaggaggaccttcaggtccgtcaggaccaactggaccaggttatccaagtgggccaatg
ggtccaggaggtccaagcggttttccaggaagaccgggaggacctcaaggtccatctggt
cgtccaggacccggatatttaactccaccggtaggaccatcaggacctcaaggctctcaa
gaaccaggatatcctggtggaagacctcagggaccttctggaccttcaggaagaccacag
ggacctagtcccagttatccaggaccaagtggaccatctccaggatatccaagtggccag
cctcaaggacctcctggaccgccgagctacccaggtccaggaacaccgagtggtcgtcca
caaggacctagtggaccaggaggatatcctagtggtagaccgagcggtccatcgtttcca
agtggaccaagcggacctactgggccagggacgagtccattcccgccacaaggtcccccg
aagccagatcgtgagtacttgccgccacggattggataa
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