Camponotus floridanus (Florida carpenter ant): 105248990
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Entry
105248990 CDS
T03919
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105248990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfo04131
]
105248990
Membrane trafficking [BR:
cfo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105248990
Protein recycling
Other Rab GTPase associated proteins
105248990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
PRANC
Motif
Other DBs
NCBI-GeneID:
105248990
NCBI-ProteinID:
XP_019882333
UniProt:
E1ZVX6
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MYSTKTPTLRIDEADLKCKNGCGFYGNAEWEGYCSKCHREHLQKRRAQAERTSHSQVSDT
DNINRSLSAGSHKEEKKVQQEKKYKLLNISFRKPTAKVQGYQELYHELLKDNPDLEKIKA
ENRDLLLYIAKTPIEKDVRKCIHSFVVDILQNKDIKRIEELSEITQNFYHVFGKRLENST
KYADIPSDIKEKLLDYVERYAMTLLYRILFCPPFTSDEEKDLAIQKRIRQLNWVSGKNLE
CRIHETSSEVRELVYTSITDLLNMDSAKAPQEKLACVIHCCRNIFLLLQQSVDGPASADE
FLPALIFIVLKANPARLKSNINFITRFCNASRLMTGEGGYYFTNLCCAVSFIENLTAESL
NMAEKDFNAYMSGECVPANTWESALMICESLHFMCEDITLLDDLQAKNADIMKQAEELKN
KMIEFKEKIKEDVSKVIERTPLLISHSQRIPTNLDSEDFESYQLPPPIIPQIYPHSIGDN
VNSGVMTDLSSDLMRTSLVEDSVTPSPTFDFPSLIGDDSLEASKGEDETSLISLDTQSDV
ALGESQLFKKHMTDSLIDESPTLEANLCPPVLKPISSEDYHGFTIQGSNIPTIPCNTGDS
STADLDSDNYSSYYQNM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtattctacgaaaacaccgactctccggattgacgaggctgatttgaagtgtaaaaac
ggctgtgggttttatggcaacgcagaatgggaaggttattgcagcaaatgtcatcgggaa
cacttacaaaaacgacgcgctcaggctgaacgcacatctcattcgcaagtttcggacaca
gataacattaatcgatcactgagtgctggaagtcataaggaggagaaaaaagtacagcaa
gagaaaaaatataaattgttaaacatttcatttaggaaacctaccgcaaaagttcaaggt
tatcaggaattatatcatgagttattaaaggacaatccagatcttgaaaaaattaaggca
gaaaatcgagatttattgttatatatagccaaaactcccatagaaaaggatgtacgaaag
tgcatacattcatttgtagtagacatactccaaaacaaagatataaaaagaatagaagaa
ttgtcggagataacacaaaatttttatcatgtgtttgggaaacgcttagaaaatagcacc
aaatatgcagatataccatcagatattaaagagaaattgttagattatgttgaaagatat
gcaatgactttgttgtatagaattctcttctgtcctccattcacatcagatgaagaaaaa
gatttggctatacaaaaaaggatacggcaattaaattgggttagcggtaaaaatttagaa
tgcagaattcacgaaacaagctcagaagttagagaacttgtttacacatccattacagat
cttttaaatatggattctgccaaagcacctcaagagaaattggcatgtgttattcattgc
tgtagaaatatattcttattattacaacaatctgtcgatgggccagcatctgctgatgaa
ttccttccagcactcatatttattgttttaaaagctaatcctgcgcgtctcaagagcaat
ataaattttattacaagattttgcaatgccagtagattaatgactggagaaggaggatat
tacttcacaaatctgtgttgtgctgtgtcatttatcgaaaacttgactgcagaatcctta
aatatggctgagaaggactttaatgcatacatgtcaggggaatgcgttccagctaataca
tgggaatcggctcttatgatatgcgaaagtttacactttatgtgtgaagatataactttg
ttggatgatttgcaagctaaaaatgctgacattatgaaacaagcggaagaactgaaaaac
aaaatgatagaattcaaagaaaagattaaagaggatgtgagtaaagtgattgaaagaaca
ccattgttgatatctcacagtcagagaatacctactaatttagatagcgaggatttcgaa
agctatcagctaccgccgccaattattccacagatatatccgcattctatcggcgataat
gtaaatagcggtgtaatgacagatctatctagtgatttgatgagaacatcattggtagag
gattccgtgacgccgtcgccgacatttgactttccatcccttatcggcgacgatagtctg
gaagctagtaagggcgaagacgaaactagtctcatcagtttagatacacaatctgatgtt
gctcttggcgaatcacagctctttaaaaaacacatgacagatagtttaatagacgagtcc
ccaacacttgaagcaaatttatgtccacctgtattgaaaccgattagctctgaagattat
catggtttcacaattcaaggatcaaatataccaacaataccatgcaatacaggcgattca
tctacagcagatttagactcggataactattccagttactatcaaaacatgtag
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