Camponotus floridanus (Florida carpenter ant): 105249134
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Entry
105249134 CDS
T03919
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03430
Mismatch repair
cfo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105249134
03460 Fanconi anemia pathway
105249134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfo03400
]
105249134
DNA repair and recombination proteins [BR:
cfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105249134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
105249134
NCBI-ProteinID:
XP_011252685
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MMDEPVATTEKSKKIEAINKETIHHICSGQVVFDLAIAVKELVENSLDSNATVIDVKLID
YGKTCISVSDNGSGVLEQDFEGLGLKHHTSKLREFTDLTEVNTFGFRGEALSSLCALSEL
SIVTRHSTSKHGFKLEFDQNGMLTKKEPCAREKGTTVHIKNIFKNLPVRAKEFQKNLKKE
YTRAIQVLYSYCLVSTNIKIACSNLIASKSPHLIVTTRNTDSVLDNINSVFGKKSLDGII
KLELQSPDETTLQEYNLSNDVTIDFDWECYVSTCDHAIGRSSPDRQFFYVNGRPCDLTKV
SKLVNNVYHKYNNKQYPFVFLNVKLNRQCADVNVTPDKRTIFFTQERLILATLKFSLTAK
WDKLQGNFTAKPLTELKFGFKRTISSNYVHPPAKRLQISPSISHMAKNDDIQTNIKSMKK
PIDVEMTISFTIIKEKLKEKKIIVRAPVNIEKRIKYRIQMEANQDEAEKELQRELTKDSF
GKMEVIGQFNLGFIITRLENDLFIIDQHATDEKFRFEKLSNETKLKTQKLIVPKPMNFSA
LSETILIEHQKMFEDNGFTFNINEQAELGKKIELIGMPVSGHWQFGQEDIEELVFLIREA
GNEIKEKHIFRPSRVRQMLASRACRSAVMIGTALNTNEMHKLIMQMAQMQNPWNCPHGRP
TIRHILSLLLINK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaacctgtcgcaacaacggaaaagtcgaaaaaaatagaagctataaataaa
gaaactattcatcacatttgctccggtcaggtagtatttgatctcgcaatcgctgtcaaa
gagttagtagagaatagtttggatagcaatgccacggtgattgatgttaaacttattgac
tatggtaaaacctgcattagtgttagtgataatggtagtggtgttttagaacaggatttt
gaaggtttaggcttgaagcatcatacatcaaagctacgggaattcacagacttaactgaa
gtaaatacatttggctttcgtggcgaagcattgagttcattatgtgcattgtccgaattg
agtattgtcactaggcattcaactagcaaacatggcttcaaattagaatttgatcaaaat
ggtatgcttacgaaaaaggaaccatgtgctagagaaaagggaaccacagtgcatataaag
aatatattcaaaaatctacccgtgagagcaaaggagtttcagaaaaatctgaagaaggag
tatacacgtgcaattcaagttttgtatagttattgtttagtttccaccaacattaagatt
gcatgttccaatttgatagcgagcaaatcgcctcaccttatagtaactacaagaaataca
gacagtgtattggataatataaattcagtgtttggaaaaaagtctttagatggaataatt
aaacttgaattacaatctccagatgaaacaacattgcaagaatataatttgtctaatgat
gttacaatagattttgattgggaatgttatgtgagcacttgtgatcacgcgattggacgt
tcatcgcccgatcgacaatttttttacgtgaatggtcgaccgtgcgatctcacgaaagtc
agcaaactggtgaacaatgtataccataaatacaataataagcagtatccatttgttttt
ttaaatgtcaaattaaatcgacaatgtgccgacgttaatgttactcctgataaaaggaca
atatttttcacgcaagaacgtctcatattagcaacattaaaatttagtttaacggcgaaa
tgggataaactgcaaggaaattttacagccaagcctttaacagagttaaagtttggtttt
aagaggacaatttcatctaattatgttcatccgccagcaaagagattgcaaatatcacct
tcaatatctcacatggcaaaaaatgatgatattcagactaatattaaatcaatgaaaaaa
cctatagatgtagaaatgacaataagctttacaataattaaagaaaaattaaaagaaaaa
aaaatcattgttagagcacctgtcaatatagaaaaaagaataaaatatagaatacaaatg
gaggctaatcaagatgaagctgaaaaagaattgcaaagagaactgacaaaagattcattt
ggcaaaatggaggtaataggtcagtttaatctcggttttataataactcgtttggagaac
gatttatttattatcgatcaacatgctactgacgaaaaatttcgtttcgagaaactcagt
aatgaaacaaagctaaaaacccaaaagcttatcgtgccaaagccaatgaatttttctgca
ttaagtgaaacaatacttatagagcatcaaaaaatgttcgaagataatggatttaccttc
aatatcaacgagcaagctgaacttggcaagaagatagaattaataggaatgcctgttagt
ggtcattggcaatttggtcaagaggatatagaggaattagtatttctcatcagagaagcg
ggtaacgaaattaaggagaagcatatatttcgtcctagtcgtgttagacaaatgctagca
tctagggcgtgtcgcagtgcagtaatgattggcacagctctaaacaccaatgagatgcac
aagctgataatgcaaatggcacaaatgcagaatccatggaattgcccccatggtaggcct
accataaggcatatattgtcgttattattaataaataaatga
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