KEGG   Camponotus floridanus (Florida carpenter ant): 105249227
Entry
105249227         CDS       T03919                                 
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    105249227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfo03400]
    105249227
DNA repair and recombination proteins [BR:cfo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     105249227
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27 BMT5-like
Other DBs
NCBI-GeneID: 105249227
NCBI-ProteinID: XP_011252841
LinkDB
Position
Unknown
AA seq 924 aa
MAVQPNQQLSMDPPTQQSFVRFFKSLPEKLDTTIRFFNRSDYYTLHGSDALFAAQEVFKT
TSVCKMIGAEPHKTEGVILNKGHFETFVRDLLLVKQYRVEVYVNQGSSKNQNWVLEHKGS
PGNLSHFEDILFGNNDIAVGVSVIAVKLGTEGKSRVVGLSCVDVVSTLILVGEFQDNESF
SNLESLIVTLAPKECLLIQGEGSYEFQTLKQLIERNNVMVTLRKRNEFSSDSIIDDLNTL
IKFKKGQKQNAQSLPEVNLNLAMSATSALIKYLDLTSDEGHMNQFSLKQVEQSRYIRLDS
AAIKALNIEPQIDGVSNLHGNPAASVLTLLDKCRTAQGHRLIAQWVRQPLRDLSLIKERH
DIVELLVNNNELRSILNDDYLKRIPDLQQLAKKLARKKSALQDCYKIYLCVSYLPKLLEQ
LLPEANMTALKAMIIDPLKELIEDMDKFQQLVEQTIDLDAAEKGDFMVNPGFADDFKELK
DAMDETEERIQRQLGKAADDLGMEAGKTLKLESNQQLGYYFRITLKEEKILRNNKRYTIL
DSNKAGVRFRNSKLSELNDEFIVARNKYLERQKDVITEIMGIAAGYSETVRTIGGVLACL
DVLTAFASAAISANKVYVRPEMVPSEEGELNLIQVRHPCLEMQQGVDYIANDINFKRDQY
HFCIITGPNMGGKSTYIRSVGVAALMAHIGSFVPCDKATISLLDCILARIGADDSQLKGL
STFMTEMIETAAILKTATCNSLVIIDELGRGTSTYEGCGIAWSIAEHLAKDIRSYCLFAT
HFHEITRLAEEVPTIQNHHVTALVEDNKLTLLYTVKPGICDQSFGLHVAKMANFPPDVIE
FAKRKQAELEDYQSVVFEGSNNSHKKRKIIQEAETLISQFFKKCKTLALTSLSDADLENK
VLVFKEDILSHKNPYIKALLDASS
NT seq 2775 nt   +upstreamnt  +downstreamnt
atggcagtgcaacctaatcaacagcttagtatggatcctcccacacaacagagctttgtc
agattttttaagagtcttccagagaaacttgacacgacgatacgattctttaataggtca
gactattatacattacatggaagtgatgctctctttgctgcacaagaagtatttaaaaca
acgtctgtttgtaaaatgattggagctgagccacataagacggaaggagttattctcaat
aaaggccattttgaaacatttgtgcgtgatttgttattagttaaacaatacagagttgaa
gtctatgtgaatcaaggctcctctaaaaatcagaactgggttttggaacacaaaggttca
cccggcaatctatctcactttgaagacattttattcggtaataatgatatagccgtgggt
gtatctgtaatagctgtgaaactaggtacagaaggaaaatccagagtcgttggattgagt
tgtgtggatgttgtttcgactttaattttagtcggtgagtttcaagataacgagtcattt
tcgaatttagaatctctcattgtaactctggctccgaaagagtgtttactaattcaagga
gaaggcagttatgaatttcaaactcttaaacaactaatagaaagaaacaatgtgatggtc
actttaagaaagagaaatgaattttccagtgattcaatcatagatgacttaaatacatta
ataaaatttaagaaaggacagaagcagaatgcgcaatcactacctgaagttaatttaaat
ttagctatgtctgctacttctgctctcatcaaatatttagatttaacatcagacgaaggc
catatgaatcagttcagtctaaaacaagtggagcaatcgcgatatataagattagattcc
gcagcaataaaagctcttaatatagaaccgcagattgatggggtttctaacttacacgga
aatcctgccgccagtgtcttaacgttattagacaagtgcagaaccgctcaaggtcatcga
ttgattgcgcaatgggttcgacaacctcttagagacttgtctctcataaaagaacggcat
gatatcgttgagttattagtaaacaataacgaattaagatccattcttaatgatgactat
ttaaaacgtatacctgatttgcaacagctcgcaaaaaaattggctagaaagaaatcagca
ttacaagattgttacaaaatttacttgtgtgtatcatatttgccaaaactattagaacaa
ctcttaccagaagcaaatatgacagcactgaaagcaatgataatagatccattaaaagaa
ttgatagaggatatggataaatttcaacaattagtggagcaaacaatcgatttagatgct
gctgaaaagggagattttatggttaatcccggatttgcggatgatttcaaagaattaaaa
gatgctatggatgaaacagaggaaaggatacaacgacaactcggtaaagcggcagatgat
cttggcatggaagcagggaaaacgctaaaattagaatctaatcaacaattgggctattat
tttcgtatcacattaaaggaagaaaaaatacttcgaaataataaacgttatacaattttg
gattctaataaagctggtgtaagattccgaaacagtaaattgagtgaattaaatgacgaa
tttatagtcgccagaaataaatatttagagagacagaaagatgttattacagagattatg
ggaatcgcagctggttatagcgaaacagtgcgtactatcggtggtgtgctggcatgcctc
gacgttctcacagcgtttgcttctgcggcaataagcgctaacaaggtgtacgtgcgtcct
gaaatggtcccgagtgaagaaggtgaattgaatctcattcaagttagacacccgtgtttg
gaaatgcaacaaggagtcgactatattgccaatgatatcaattttaagcgagatcaatat
catttttgcattattactggcccaaacatgggaggtaaaagtacttacattagatctgtc
ggtgtagctgcactaatggcacatatcggtagttttgttccttgtgataaagctactata
tcattattggattgtatattggctcgaataggagctgacgactctcaattgaaaggattg
tcaacttttatgacggaaatgatagaaactgctgctattttgaaaacagcaacatgtaat
tctcttgtaattattgatgagctgggtagaggaacatctacttatgaaggttgcggtata
gcatggtcaatagcagaacatttggcaaaggatatcagatcatattgtctgtttgctaca
catttccatgagatcaccagattagccgaagaagtacctactatacaaaatcaccatgtt
actgctcttgtcgaagataacaaattaacgttactttatacagtaaaaccagggatttgt
gatcaaagttttggtcttcatgtcgctaaaatggctaattttccaccagatgtgatagag
tttgccaaaagaaagcaagcagaacttgaggattatcaaagtgtagtttttgaaggatct
aataattcccacaagaaacgaaagattattcaggaagctgaaacactcatttcacaattc
ttcaaaaagtgtaaaactttggctctgacatctttatccgatgctgatttagaaaataag
gtattagtattcaaggaagatatactatctcataagaatccttacattaaagcattactc
gatgcttcttcttaa

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