Camponotus floridanus (Florida carpenter ant): 105249227
Help
Entry
105249227 CDS
T03919
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105249227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfo03400
]
105249227
DNA repair and recombination proteins [BR:
cfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105249227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
BMT5-like
Motif
Other DBs
NCBI-GeneID:
105249227
NCBI-ProteinID:
XP_011252841
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MAVQPNQQLSMDPPTQQSFVRFFKSLPEKLDTTIRFFNRSDYYTLHGSDALFAAQEVFKT
TSVCKMIGAEPHKTEGVILNKGHFETFVRDLLLVKQYRVEVYVNQGSSKNQNWVLEHKGS
PGNLSHFEDILFGNNDIAVGVSVIAVKLGTEGKSRVVGLSCVDVVSTLILVGEFQDNESF
SNLESLIVTLAPKECLLIQGEGSYEFQTLKQLIERNNVMVTLRKRNEFSSDSIIDDLNTL
IKFKKGQKQNAQSLPEVNLNLAMSATSALIKYLDLTSDEGHMNQFSLKQVEQSRYIRLDS
AAIKALNIEPQIDGVSNLHGNPAASVLTLLDKCRTAQGHRLIAQWVRQPLRDLSLIKERH
DIVELLVNNNELRSILNDDYLKRIPDLQQLAKKLARKKSALQDCYKIYLCVSYLPKLLEQ
LLPEANMTALKAMIIDPLKELIEDMDKFQQLVEQTIDLDAAEKGDFMVNPGFADDFKELK
DAMDETEERIQRQLGKAADDLGMEAGKTLKLESNQQLGYYFRITLKEEKILRNNKRYTIL
DSNKAGVRFRNSKLSELNDEFIVARNKYLERQKDVITEIMGIAAGYSETVRTIGGVLACL
DVLTAFASAAISANKVYVRPEMVPSEEGELNLIQVRHPCLEMQQGVDYIANDINFKRDQY
HFCIITGPNMGGKSTYIRSVGVAALMAHIGSFVPCDKATISLLDCILARIGADDSQLKGL
STFMTEMIETAAILKTATCNSLVIIDELGRGTSTYEGCGIAWSIAEHLAKDIRSYCLFAT
HFHEITRLAEEVPTIQNHHVTALVEDNKLTLLYTVKPGICDQSFGLHVAKMANFPPDVIE
FAKRKQAELEDYQSVVFEGSNNSHKKRKIIQEAETLISQFFKKCKTLALTSLSDADLENK
VLVFKEDILSHKNPYIKALLDASS
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcaacctaatcaacagcttagtatggatcctcccacacaacagagctttgtc
agattttttaagagtcttccagagaaacttgacacgacgatacgattctttaataggtca
gactattatacattacatggaagtgatgctctctttgctgcacaagaagtatttaaaaca
acgtctgtttgtaaaatgattggagctgagccacataagacggaaggagttattctcaat
aaaggccattttgaaacatttgtgcgtgatttgttattagttaaacaatacagagttgaa
gtctatgtgaatcaaggctcctctaaaaatcagaactgggttttggaacacaaaggttca
cccggcaatctatctcactttgaagacattttattcggtaataatgatatagccgtgggt
gtatctgtaatagctgtgaaactaggtacagaaggaaaatccagagtcgttggattgagt
tgtgtggatgttgtttcgactttaattttagtcggtgagtttcaagataacgagtcattt
tcgaatttagaatctctcattgtaactctggctccgaaagagtgtttactaattcaagga
gaaggcagttatgaatttcaaactcttaaacaactaatagaaagaaacaatgtgatggtc
actttaagaaagagaaatgaattttccagtgattcaatcatagatgacttaaatacatta
ataaaatttaagaaaggacagaagcagaatgcgcaatcactacctgaagttaatttaaat
ttagctatgtctgctacttctgctctcatcaaatatttagatttaacatcagacgaaggc
catatgaatcagttcagtctaaaacaagtggagcaatcgcgatatataagattagattcc
gcagcaataaaagctcttaatatagaaccgcagattgatggggtttctaacttacacgga
aatcctgccgccagtgtcttaacgttattagacaagtgcagaaccgctcaaggtcatcga
ttgattgcgcaatgggttcgacaacctcttagagacttgtctctcataaaagaacggcat
gatatcgttgagttattagtaaacaataacgaattaagatccattcttaatgatgactat
ttaaaacgtatacctgatttgcaacagctcgcaaaaaaattggctagaaagaaatcagca
ttacaagattgttacaaaatttacttgtgtgtatcatatttgccaaaactattagaacaa
ctcttaccagaagcaaatatgacagcactgaaagcaatgataatagatccattaaaagaa
ttgatagaggatatggataaatttcaacaattagtggagcaaacaatcgatttagatgct
gctgaaaagggagattttatggttaatcccggatttgcggatgatttcaaagaattaaaa
gatgctatggatgaaacagaggaaaggatacaacgacaactcggtaaagcggcagatgat
cttggcatggaagcagggaaaacgctaaaattagaatctaatcaacaattgggctattat
tttcgtatcacattaaaggaagaaaaaatacttcgaaataataaacgttatacaattttg
gattctaataaagctggtgtaagattccgaaacagtaaattgagtgaattaaatgacgaa
tttatagtcgccagaaataaatatttagagagacagaaagatgttattacagagattatg
ggaatcgcagctggttatagcgaaacagtgcgtactatcggtggtgtgctggcatgcctc
gacgttctcacagcgtttgcttctgcggcaataagcgctaacaaggtgtacgtgcgtcct
gaaatggtcccgagtgaagaaggtgaattgaatctcattcaagttagacacccgtgtttg
gaaatgcaacaaggagtcgactatattgccaatgatatcaattttaagcgagatcaatat
catttttgcattattactggcccaaacatgggaggtaaaagtacttacattagatctgtc
ggtgtagctgcactaatggcacatatcggtagttttgttccttgtgataaagctactata
tcattattggattgtatattggctcgaataggagctgacgactctcaattgaaaggattg
tcaacttttatgacggaaatgatagaaactgctgctattttgaaaacagcaacatgtaat
tctcttgtaattattgatgagctgggtagaggaacatctacttatgaaggttgcggtata
gcatggtcaatagcagaacatttggcaaaggatatcagatcatattgtctgtttgctaca
catttccatgagatcaccagattagccgaagaagtacctactatacaaaatcaccatgtt
actgctcttgtcgaagataacaaattaacgttactttatacagtaaaaccagggatttgt
gatcaaagttttggtcttcatgtcgctaaaatggctaattttccaccagatgtgatagag
tttgccaaaagaaagcaagcagaacttgaggattatcaaagtgtagtttttgaaggatct
aataattcccacaagaaacgaaagattattcaggaagctgaaacactcatttcacaattc
ttcaaaaagtgtaaaactttggctctgacatctttatccgatgctgatttagaaaataag
gtattagtattcaaggaagatatactatctcataagaatccttacattaaagcattactc
gatgcttcttcttaa
DBGET
integrated database retrieval system