Camponotus floridanus (Florida carpenter ant): 105249577
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Entry
105249577 CDS
T03919
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfo03041
]
105249577
Enzymes [BR:
cfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105249577
Spliceosome [BR:
cfo03041
]
Complex C
Other components
Complex C specific factors
105249577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
ABC_tran
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
105249577
NCBI-ProteinID:
XP_011253446
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MFRPFFSKPGESMWQEDKPDIDAHSSTQFVYNAHHSLALDMQRQRLPIFKNKNHIIYLLE
KYQTLVLVGETGCGKSTQVPQYLLEAGWCADGKKIGITEPRRVAATSLANRVADEHNCIL
GTIVGYCIRFDDYTDETTKIKYMTEGILLRELMSDPLLTSYSVIILDEVHERTLLTDIIM
GLLKKIIRKRKSLKIIVSSATVDAEELRDFFNVNTTKDSSKDSAIIMSVEGRLYPVDVFF
LKEPVANYVNGVVDTVLKIHETEESGDILAFLTGLDEVDQAVSLLSEHAKLIKDGKQKLL
PLPMYGSLPNAEQLKVFWRAAKDTRKVIVATNIAETSITIPNIVYVIDCGFVKIPWFEVE
TQTNSLVIVPVSKASADQRAGRAGRIRTGKAFRLYTEEAYAELFEATPPEMQRSDLAPAI
LQLKALGIDNVLRFNFPSAPPSKNLVTGLELLYALGAIDNNGDLTIPLGLTMAEMPLEPV
LAKSLITSGEMGCSVEITTILAMLQVQNIFIQPGGGQAALKARIAHRKFEVEEGDLLTLL
NVYTAYEQNKTPAWCQKHFLNHKALRRATEIRTQMHKMLKRLDISSTSCNGNIQQILKCL
TAGLFPKAAYLHYTGVYRTVRGNKDLYIHPNSCLYTLQQPQWLLFCEILQTNKTYMKDLT
VIQPEMLLEAAPHFYESTFIESV
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggccgtttttctctaaaccaggagaaagcatgtggcaggaggataagcctgat
atcgatgcccattcatcaacacaatttgtttacaatgcgcaccactcacttgcacttgac
atgcagcgacaacgattacccatatttaaaaataagaatcatattatttacttattggag
aaatatcagaccttggtcctggtaggcgaaacaggctgcggtaaaagcacacaagtgcca
cagtatcttcttgaagcaggatggtgcgcggatggaaaaaagatcggcatcacggaaccc
agaagagtcgcagcaacttctctagcgaatcgcgtggctgacgaacacaattgcatacta
gggaccatcgtcggttattgcatacggttcgatgattatactgatgagacgaccaagatt
aagtatatgacagagggtattcttctaagagaattaatgagcgatccattattgacaagc
tactcggtcattatcttagatgaagtgcatgagagaacgctcctaactgatattataatg
ggattgctgaaaaaaataatcaggaaacggaagagtctaaaaattatcgtctcatcggcg
acggttgatgcggaggaacttcgagacttcttcaatgtaaatacaaccaaagattcgagt
aaagatagcgctattataatgagcgtcgaaggacgattatatccggtagatgtctttttt
ctaaaagagccagtggcaaattacgttaacggcgtagtagacaccgttttaaaaatacat
gaaacagaggaatcaggagatatcctagcgtttctcacgggactcgatgaagtcgatcaa
gccgtttctctcttgtcggaacatgcgaagcttataaaagacggcaaacagaaattgctt
ccgttgccgatgtacggatcgcttccaaacgcggaacagctaaaggtattttggagggcc
gctaaagacactcgcaaagttatcgtagcgactaacattgcggaaacatctatcactatt
ccaaatatcgtttatgtaattgattgcggtttcgtcaagataccctggttcgaagtagaa
acgcaaacgaacagtcttgttatcgtacccgtatcgaaggcttccgctgaccaacgagct
ggccgtgctggtcgcattcgcacaggaaaagcatttagattatatacagaagaggcttac
gctgaattattcgaggctactccaccggaaatgcaacgatcagatttagcaccggcaatt
ctgcaactaaaagcactggggattgataacgtgttgcggttcaattttccgtctgcaccg
ccaagcaagaatttagtcacgggattagaattgctttatgcactaggtgcaatcgacaat
aatggcgatttgacgataccgttaggtttgacgatggcggagatgccattggagccggtg
ctggcgaaatctttaatcacatctggtgaaatgggatgttctgtcgagatcacaacgata
ttagccatgctacaagttcagaatatttttatacaacctggcggaggacaagcagctctg
aaagcaagaatagcacatcgcaagtttgaggtggaagaaggagatcttcttactttatta
aatgtctatacggcttatgaacagaataaaacgcctgcctggtgtcagaaacattttctc
aatcacaaagctttgcggagagccacagagattcgcacacagatgcataagatgttgaaa
cgtttggacatttcatcgacttcctgcaatgggaatattcaacaaattctcaagtgtcta
acagctggtctcttccctaaagcagcatatttacattatacgggtgtgtacagaacagtt
cgaggtaacaaggatttatatattcatccaaatagctgcttatatactctgcaacaaccg
caatggttactattttgtgaaattttgcaaacgaataaaacctatatgaaagatctgact
gttattcaaccagaaatgttattggaagcagcgccacatttttatgaaagtacatttatc
gaatctgtttag
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