Camponotus floridanus (Florida carpenter ant): 105249579
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Entry
105249579 CDS
T03919
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfo01009
]
105249579
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfo03021
]
105249579
Enzymes [BR:
cfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105249579
Protein phosphatases and associated proteins [BR:
cfo01009
]
HAD phosphatases
Fcp/Scp phosphatases
105249579
Transcription machinery [BR:
cfo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105249579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
105249579
NCBI-ProteinID:
XP_011253448
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MSATKKLKFKEERQKIKKMSKAQMQLAIIKKKQCDAKALAIVEQLLEPNVNSEWLLQNLR
FISKSHMEDVIEERAIVKLCGYVLCSKPLTVVIRQQYHISMHRNKVYDISRRKNFCSSSC
YGAANYLLEQMLESPLWLREIDDIPIFQILPIDPKSKQCTPGDEINISEINLKSQNINTD
NSDNKESTEHNTGQQAKDVLLSLEEKNIYSSYLSNNIINDDNKLEEIPVNINSQKFETLS
HLYMNQEKRDDNHSEESIDCKSSYTNVHKINLDSENLEIKVAEQSANILHLHEYNSRDAQ
NKNVHVTCANNDSKTLQSELDEIINENNCNKMLPLNEISNDTKDVNKKSNENNEKLQPQS
DKTNNSNNDNRKTIHPQLDEICNTNTTISSKSYNEHRKKGNTDRINKNKKYKQKESDNTE
VQTNIYHKLVIHVEQSVKEWITENTLCLLMGEMDEKHQLLQNLTQQDRYQQLCKKLNRLQ
LEDEKEERANLERDELKPLPHFSVLEEEGKKIDLKVRAFYKGQITISPEDDDKESKNKDS
NDSVLPLTDAHAPNALRRRIFLDKLNKILPDLMRALTLNVDSSSMAQCTYDHERYLLIKI
LSSTFNLSATNIIFKTAEWTLVGLIMIKMLSLIDVQLQSLLQSKQTSMYISMILTTYKLD
SSYLDRFIMEVTNTVNTSK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgactaaaaagctaaaatttaaagaagaaagacagaaaattaagaagatgagt
aaggcgcagatgcagctagctataataaaaaagaagcaatgcgacgcaaaagctcttgca
atagtcgagcaacttttggaaccaaatgtaaattccgagtggctacttcaaaatttaaga
tttataagtaaaagtcacatggaagatgttatagaagagagagcgatagtaaagttatgc
ggatatgttttatgttcaaaacctttgactgttgttatccgacaacagtatcatatatcg
atgcatagaaacaaagtatatgatattagcagacggaaaaatttttgtagttcatcatgc
tatggtgctgccaattatcttcttgaacaaatgctggagagtccactatggttgagagaa
atagatgatataccaatatttcaaatattgcctattgatcctaagtctaaacaatgtact
cctggagatgaaatcaatattagtgagattaatctgaaatcacaaaatataaataccgac
aatagtgataataaagaatctacagaacataacactggccagcaagcaaaagatgtatta
ttaagtctcgaggaaaaaaatatatatagttcttatttatcaaataatataattaatgat
gacaataaactagaagagattcctgtaaatattaattcacaaaagtttgaaactttatca
cacttatatatgaatcaagagaagagagatgataatcattctgaagaatctatagattgt
aagagcagctatactaatgttcataaaataaatttagattcagagaatttagaaataaaa
gttgctgagcaatctgcaaatattctacacttgcatgaatataatagcagagatgcacaa
aataaaaatgtacatgttacatgcgctaataatgatagcaaaacattacagtctgaatta
gatgaaataattaacgaaaacaattgtaataaaatgttacctttgaatgaaataagtaat
gacacgaaagatgtaaataaaaaaagtaatgaaaataatgaaaagctacaacctcaatca
gataaaacaaataatagtaataatgataatagaaaaactatacatcctcaattggatgaa
atatgtaatactaatactacaatttcatcgaaatcttacaatgaacatagaaaaaaggga
aatacagatagaattaataaaaataaaaagtataagcagaaagaatctgacaatacagaa
gtacaaactaatatttaccataaacttgtaatacatgttgaacaaagtgttaaagaatgg
attacagaaaatacactttgtcttctaatgggtgaaatggatgagaaacaccaattgtta
caaaatcttacgcagcaggataggtatcaacagttgtgcaaaaaattaaaccgattgcag
ctagaagatgaaaaggaagagcgtgccaatttagaaagagatgagctcaaacctctgcct
cacttctctgtacttgaagaagagggaaaaaagatcgacttgaaggtgcgtgcattttac
aaaggacaaataacaatatcgcctgaagatgatgataaggaatcaaaaaataaagacagt
aatgattctgtattaccattaacggatgctcacgctcctaatgcacttcgtcgccgaatt
ttcttggataagcttaataaaatattgccagatttgatgcgtgctttaactctcaacgtg
gacagttcttcaatggcacaatgtacttatgatcacgagagatatttgttaatcaaaatc
ttgagtagcacttttaatttatctgctacaaacattatttttaaaactgccgaatggaca
cttgtaggacttatcatgattaaaatgttaagtctaattgatgtacaattgcaatcattg
ctccaatctaaacaaacttcaatgtatatatcaatgattcttacaacatacaaactggat
tccagctatttggacagatttataatggaagtgacgaacactgtaaatacatccaaataa
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